Gene
RNA
| Item | Value |
|---|---|
| gene id | G251073 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 35882721 ~ 35883100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU286304 | True | 380 | lncRNA | 0.45 | 1 | 35882721 | 35883100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-34d22.1 | LOC106584244 | coding | downstream | 679778 | 35175483 ~ 35202943 (-) |
| taf12 | taf12 | coding | downstream | 707457 | 35169845 ~ 35175264 (-) |
| LOC118944512 | NA | coding | downstream | 792328 | 35089126 ~ 35090393 (-) |
| cited4b | LOC106584212 | coding | downstream | 830440 | 35049466 ~ 35052281 (-) |
| vegf | vegf | coding | downstream | 1051493 | 34814879 ~ 34831228 (-) |
| LOC110519653 | LOC106584320 | coding | upstream | 219743 | 36102843 ~ 36109194 (-) |
| stmn1b | LOC106584327 | coding | upstream | 229087 | 36112187 ~ 36117544 (-) |
| LOC110519907 | oprd1 | coding | upstream | 553281 | 36436381 ~ 36437754 (-) |
| LOC110504056 | NA | coding | upstream | 603775 | 36486875 ~ 36505339 (-) |
| tent5ba | fam46b | coding | upstream | 661070 | 36544170 ~ 36568553 (-) |
| G251068 | NA | non-coding | downstream | 4775 | 35823732 ~ 35877946 (-) |
| G251070 | NA | non-coding | downstream | 38446 | 35841909 ~ 35844275 (-) |
| G251059 | NA | non-coding | downstream | 63008 | 35819500 ~ 35819713 (-) |
| G251057 | NA | non-coding | downstream | 65437 | 35816638 ~ 35817284 (-) |
| G251048 | NA | non-coding | downstream | 80103 | 35744939 ~ 35802618 (-) |
| G251074 | NA | non-coding | upstream | 1297 | 35884397 ~ 35885085 (-) |
| G251075 | NA | non-coding | upstream | 2890 | 35885990 ~ 35886211 (-) |
| G251384 | NA | non-coding | upstream | 60186 | 35943286 ~ 36004007 (-) |
| G251498 | NA | non-coding | upstream | 236575 | 36119675 ~ 36119874 (-) |
| G249990 | NA | other | downstream | 986425 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 992767 | 34889506 ~ 34889954 (-) |
| G249485 | LOC106584080 | other | downstream | 1523270 | 34357275 ~ 34359451 (-) |
| G248239 | LOC106605043 | other | downstream | 2463014 | 33419429 ~ 33419707 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 4301519 | 31562384 ~ 31631107 (-) |
| G251462 | LOC106584332 | other | upstream | 257012 | 36140112 ~ 36144572 (-) |
| G251681 | NA | other | upstream | 474383 | 36357325 ~ 36357971 (-) |
| gpatch3 | gpatch3 | other | upstream | 848745 | 36731832 ~ 36754332 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 3516161 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 3761471 | 39644571 ~ 39645743 (-) |
