Gene
RNA
| Item | Value |
|---|---|
| gene id | G251683 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 36360774 ~ 36361389 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phosphatase and actin regulator 4B-like isoform X9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU286966 | False | 616 | lncRNA | 0.62 | 1 | 36360774 | 36361389 |
| TU286967 | True | 507 | lncRNA | 0.67 | 1 | 36360883 | 36361389 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stmn1b | LOC106584327 | coding | downstream | 243230 | 36112187 ~ 36117544 (-) |
| LOC110519653 | LOC106584320 | coding | downstream | 251585 | 36102843 ~ 36109194 (-) |
| si:dkey-34d22.1 | LOC106584244 | coding | downstream | 1157831 | 35175483 ~ 35202943 (-) |
| taf12 | taf12 | coding | downstream | 1185510 | 35169845 ~ 35175264 (-) |
| LOC118944512 | NA | coding | downstream | 1270381 | 35089126 ~ 35090393 (-) |
| LOC110519907 | oprd1 | coding | upstream | 74992 | 36436381 ~ 36437754 (-) |
| LOC110504056 | NA | coding | upstream | 125486 | 36486875 ~ 36505339 (-) |
| tent5ba | fam46b | coding | upstream | 182781 | 36544170 ~ 36568553 (-) |
| zdhhc18a | zdhhc18 | coding | upstream | 250426 | 36611815 ~ 36629130 (-) |
| LOC110519930 | LOC106584694 | coding | upstream | 274940 | 36636329 ~ 36643205 (-) |
| G251681 | NA | non-coding | downstream | 2952 | 36357325 ~ 36357971 (-) |
| G251682 | NA | non-coding | downstream | 5545 | 36354752 ~ 36355229 (-) |
| G251673 | NA | non-coding | downstream | 13140 | 36347435 ~ 36347634 (-) |
| G251661 | NA | non-coding | downstream | 24056 | 36336416 ~ 36336718 (-) |
| G251655 | NA | non-coding | downstream | 30691 | 36329875 ~ 36330083 (-) |
| G251687 | NA | non-coding | upstream | 2951 | 36364340 ~ 36364610 (-) |
| G251696 | NA | non-coding | upstream | 10416 | 36371805 ~ 36372213 (-) |
| G252124 | NA | non-coding | upstream | 26944 | 36388333 ~ 36388985 (-) |
| G252125 | NA | non-coding | upstream | 28109 | 36389498 ~ 36389962 (-) |
| G252127 | NA | non-coding | upstream | 31959 | 36393348 ~ 36393615 (-) |
| G251462 | LOC106584332 | other | downstream | 216202 | 36140112 ~ 36144572 (-) |
| G249990 | NA | other | downstream | 1464478 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 1470820 | 34889506 ~ 34889954 (-) |
| G249485 | LOC106584080 | other | downstream | 2001323 | 34357275 ~ 34359451 (-) |
| gpatch3 | gpatch3 | other | upstream | 370456 | 36731832 ~ 36754332 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 3037872 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 3283182 | 39644571 ~ 39645743 (-) |
| G256016 | LOC106581772 | other | upstream | 3457259 | 39818648 ~ 39818980 (-) |
| G256616 | NA | other | upstream | 3961117 | 40322506 ~ 40322898 (-) |
