G251840


Basic Information

Item Value
gene id G251840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36610884 ~ 36611314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU287136
acacacacacacacagttgaagtcggaagtttacatgcacttaggttggaatcattaaaactagcttttcaaccactccacaaatgtcttgttaacaaactatagttttggcaagtcggttaggacatctacttagcgcataacaagtcatttttccaacaattgtttacagacagattatttcactgtatcacaattccagtgggtcagaagtttacatatactaagttgactgtgcctttaaacaacttggaaaattctagaaaatgtcatggctttagaagcttctgataggctaattgacataatttgtgtcaaaaggtgtatggaaacttcaactgtgtatatctATCTTTGTACCCATTTCTTAAACATACACCCACAAACTCTGCCAGGAAACTTGGTAGTCTGTGGTCAGGCCAGGGTATCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287136 True 431 lncRNA 0.37 1 36610884 36611314

Neighbor

gene id symbol gene type direction distance location
rcc1 rcc1 coding upstream 223668 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 242568 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 309315 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 348917 36172193 ~ 36262289 (+)
serinc2l LOC106584332 coding upstream 466297 36125327 ~ 36144587 (+)
LOC110519932 LOC106591969 coding downstream 46153 36657467 ~ 36659553 (+)
LOC110519936 LOC106586041 coding downstream 807792 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 874269 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 1077474 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 1137381 37748695 ~ 37756709 (+)
G251835 NA non-coding upstream 14012 36596666 ~ 36596872 (+)
G251832 NA non-coding upstream 17036 36593638 ~ 36593848 (+)
G251826 NA non-coding upstream 26148 36584522 ~ 36584736 (+)
G251773 NA non-coding upstream 31577 36511574 ~ 36579307 (+)
G251748 NA non-coding upstream 141205 36467008 ~ 36469679 (+)
G251869 NA non-coding downstream 41948 36653262 ~ 36653492 (+)
G251871 NA non-coding downstream 43968 36655282 ~ 36655615 (+)
G251876 NA non-coding downstream 46614 36657928 ~ 36658161 (+)
G251881 NA non-coding downstream 53443 36664757 ~ 36681878 (+)
G251860 NA non-coding downstream 83726 36695040 ~ 36766699 (+)
LOC110519579 gmeb1 other upstream 1389512 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1437421 35153546 ~ 35173463 (+)
G249323 NA other upstream 2190272 34419890 ~ 34420612 (+)
G249245 NA other upstream 2307977 34302572 ~ 34302907 (+)
G251845 zdhhc18 other downstream 12296 36623610 ~ 36627542 (+)
G253299 NA other downstream 1115634 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1481008 38092322 ~ 38092734 (+)
G254204 NA other downstream 1829852 38441166 ~ 38441734 (+)
G254445 NA other downstream 1989173 38600487 ~ 38600866 (+)

Expression


Co-expression Network