G251845 (zdhhc18)


Basic Information

Item Value
gene id G251845
gene name zdhhc18
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36623610 ~ 36627542 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU287145
GGCATGGGCCCACACAGCGTTGCACAGCAGTTGGTAAAGATGTTGTCGTAAGTGTAGGGATTCCCAGAGTCCTCTGCACCTCTTTTACTCAACCAGGAGCCTTTTATCTGCACAGGAAAGACAAAGTTAAGAAGCAGTCTGGAGACCAAGCAGGATCAAACATTCAAGTACTGTATATTTAGGTTAATAGAATGTGTAGTGCGGCCTTGTGGTCTAGCAAGAAAACCACTTCCTCCGGCACAATGTCTACCGTGTCTGAATAGGTTGAAATCTGCCACCTGCCCTTTCACCCAACCACTCTTATCTtcgacctctgtctctctcaccattTTGAGAAACAATCCTCAAAAAAAAGTAAGTGTAGTGTACTAaacaaaatataaagcaaaaaaataaacatctctttttcaggaccctgtctttcaaagataatttgtaaaaatccaaataacttcatagatcttcattgtaaagggtttaaacactgtttcccatgcttgttcaatgaaccataaacaattaatgaacatgcaaatgtggaacggtcgttaggacactaacagcttacagacggtgggcaattaaggtcacagttatgaaaacttaggacactatagaggcctttctactgactctgaaaaacaccaaaagatgcccagggtccctgctcatctgcgtgaacgtgccttaggcatgctgaaaggaggcatgaggactgcagatgtggccagggcaataaattgcaatgtccgtactgtgagacgctctacagggagacaggacggacagctgatcatccttgcagtggcagaccacgtgtaacaacatctgcacaggataggtacatccgaacattacacctgcgggacaggtacaggatggcaacaactacCGAGTTACaacaggaatgcacaatccctccatcagtgctcagactgtccgcaataggctgagagaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagatatcaccggcaacaacatcgcctaagGGCACAAATCCAccttcgctggaccagacaggactggcaaaaagtgctcttcactgaggagtcgtggttttgtctcaccaggggtgatggttggattcgcatttatcgtcaaaggaatgagcgtaacaccgaggcctgtactctggagcgggatcgatttggaggtggagggtccatggTCTGGGGGGGTgtctcacagcatcatcggactgagcttgtcgtcattgcaggcaatctcaacactgtgttacagggaaaacatcctcctccctcatgtggtacccttccttcaGGCTCATCCTgccatgaccctccagcatgacaatgccaccagccatactgctcgttctgtgtgtgatttcctgcaagaccggaatgtcagtgttctgccattgcctagcgaagagcccggatctcaatcccattgagcacgcctgggacctgctggattggagggtgagggctagggccattccccccagaaatgtccaggaacttgcaggtgccttggtggtggaagagtggggtaacatctcacagcaagaactggcaaatcttgtgcagtccatgaggagatgcactgcagtacttaatgcagctggtggccacaccagatactgactgttacttttgattttgacccctttgttcagggacacattattcaatttctgtgtctatggaacttgttcagtttgtgtctcagttgtggaatcttgttatgttcatacaaatatttacacataaatttgctgaaaataaacccagttgacagtgagaggatgtttctttttttgctgagtttattatagGTAGTTAATCTTCAGTTACTTGTGAAGCCTCTAATTTATCCAATGCAGTAATGAGTTATGTCCTGAGTAGCAACCTAGCGGTACCAAAAGCCCTGGTCTTCCCTAGAAAACCTATGTAAATGACCATCGCCAAAACAGGCCAAACACTTTTTTAGACAGAGGTTTTGGACTTTAAAATGTGCGTGATCAACTAGCATGATCAAGTTCGATCCCTACTGAATTATTTTAAGGTTCACTACAAATCGAGATATTGTATTAAATAgggatccattctgactactacatttgTCGTAACACAGGACCACGTGCTGACAGACCATTCACAGGCCGGCAGGCTATGTGTTGACTATCAGGCAGGATGAAAACAACTACGTTGACCATGATCCTTAGCGATTTTTGGTGCCATTCAGCAATATGGGGCGCTTCAAATTCAAATAGTTCTGGCCTCATACACCATCTGGAGTTTTCTATAGGAATACATGGATGATGTCAGCGCTATCACTATCTACTATTTTCAAGATCTATGGTTGGTACTCACATCTTCATTTGTTGTGAGGTTGAAGGCCACCAAGTATGTATGGAAACCTGAAAGCCCCAGAATAGACCAAATGGAGAAGAAGCAAATAACTAGTTCAACCACACTGGCAGGATTCTCCTGTAAGGCCAGAACTAAGCCATTCCCTCCTTGGGATCGTAGCGTGAGGTGTGTGACAACACAACCGAAGATGAAggaggtgtggaaggagagagagactatgaAGCTGTAGAAGAAGCGGTAGTTACGCTTGCCCACACAGTTCCCCACCCACGGGCAATGGTGATCGAACCGCTCTGAGGGCAGAACCACACAGTTGTCACACATGCTGCAGTGTGAGGTTCGAGGAGGGCGGAACATCTTGCAGGTGAAGCAATACTTAAGCTTCACCACCTGCTGGTTAATGAGGATTTCTTTGGTGCGCGGAGGGGGGTGGTACGTGGAGGAACCTGAGGTGTCTTGAATCAGGGGAGGGATCGATTCTCTGACATCAATACAATTGTGTTGTTGACATTAACAAGATCACATATGAAACAAAATGTTAACTGAATACAAATGCCGTTGAAGGATATTAATCTGTACTATGAACACCACTGAAACAGTTGATCCCATATATACCCCAGCTGGTCTAGCTCTTCAGCCATCACCCCAGTCTGTTACACTATATCCATCTTACCTATCTGCTTCTCAATGTCTGCAGCCTCATCTGGCAAGGTCCTAGGCAGGATTCCAGGGTCTGTAAAGCTGGTCTGCAGTAGGGAGGTgaccacaaacacaaacaacactccaccaatcacagGTATGCAGACGGTCAGGTGAGTCACCAGGAA

Function

symbol description
zdhhc18 Enables palmitoyltransferase activity. Involved in peptidyl-L-cysteine S-palmitoylation. Located in Golgi apparatus.

NR:

description
palmitoyltransferase ZDHHC18-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287145 True 3209 TUCP 0.46 4 36623610 36627542

Neighbor

gene id symbol gene type direction distance location
rcc1 rcc1 coding upstream 236394 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 255294 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 322041 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 361643 36172193 ~ 36262289 (+)
serinc2l LOC106584332 coding upstream 479023 36125327 ~ 36144587 (+)
LOC110519932 LOC106591969 coding downstream 29925 36657467 ~ 36659553 (+)
LOC110519936 LOC106586041 coding downstream 791564 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 858041 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 1061246 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 1121153 37748695 ~ 37756709 (+)
G251840 NA non-coding upstream 12296 36610884 ~ 36611314 (+)
G251835 NA non-coding upstream 26738 36596666 ~ 36596872 (+)
G251832 NA non-coding upstream 29762 36593638 ~ 36593848 (+)
G251826 NA non-coding upstream 38874 36584522 ~ 36584736 (+)
G251773 NA non-coding upstream 44303 36511574 ~ 36579307 (+)
G251869 NA non-coding downstream 25720 36653262 ~ 36653492 (+)
G251871 NA non-coding downstream 27740 36655282 ~ 36655615 (+)
G251876 NA non-coding downstream 30386 36657928 ~ 36658161 (+)
G251881 NA non-coding downstream 37215 36664757 ~ 36681878 (+)
G251860 NA non-coding downstream 67498 36695040 ~ 36766699 (+)
LOC110519579 gmeb1 other upstream 1402238 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1450147 35153546 ~ 35173463 (+)
G249323 NA other upstream 2202998 34419890 ~ 34420612 (+)
G249245 NA other upstream 2320703 34302572 ~ 34302907 (+)
G253299 NA other downstream 1099406 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1464780 38092322 ~ 38092734 (+)
G254204 NA other downstream 1813624 38441166 ~ 38441734 (+)
G254445 NA other downstream 1972945 38600487 ~ 38600866 (+)
G254816 NA other downstream 2215968 38843510 ~ 38844556 (+)

Expression


Co-expression Network