G251869


Basic Information

Item Value
gene id G251869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36653262 ~ 36653492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU287183
GTGCTATGCTTGCACTCATAACTCTGCATGGTGGATGTCGGATTCCTATTCACTTCCTTCATCACTAATACctaagcattgtatttgggacaaatcattcactaaacctcaactaaatcttgtaatgaataatgtcgAAATAGATcaggttgaggtgactaaacggcttggagtaaccctggattgtaaactgtcatggtcaaaacatattgatacaacagtagctaagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287183 True 231 lncRNA 0.38 1 36653262 36653492

Neighbor

gene id symbol gene type direction distance location
rcc1 rcc1 coding upstream 266046 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 284946 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 351693 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 391295 36172193 ~ 36262289 (+)
serinc2l LOC106584332 coding upstream 508675 36125327 ~ 36144587 (+)
LOC110519932 LOC106591969 coding downstream 3975 36657467 ~ 36659553 (+)
LOC110519936 LOC106586041 coding downstream 765614 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 832091 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 1035296 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 1095203 37748695 ~ 37756709 (+)
G251840 NA non-coding upstream 41948 36610884 ~ 36611314 (+)
G251835 NA non-coding upstream 56390 36596666 ~ 36596872 (+)
G251832 NA non-coding upstream 59414 36593638 ~ 36593848 (+)
G251826 NA non-coding upstream 68526 36584522 ~ 36584736 (+)
G251773 NA non-coding upstream 73955 36511574 ~ 36579307 (+)
G251871 NA non-coding downstream 1790 36655282 ~ 36655615 (+)
G251876 NA non-coding downstream 4436 36657928 ~ 36658161 (+)
G251881 NA non-coding downstream 11265 36664757 ~ 36681878 (+)
G251860 NA non-coding downstream 41548 36695040 ~ 36766699 (+)
G251914 NA non-coding downstream 81034 36734526 ~ 36749257 (+)
G251845 zdhhc18 other upstream 25720 36623610 ~ 36627542 (+)
LOC110519579 gmeb1 other upstream 1431890 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1479799 35153546 ~ 35173463 (+)
G249323 NA other upstream 2232650 34419890 ~ 34420612 (+)
G253299 NA other downstream 1073456 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1438830 38092322 ~ 38092734 (+)
G254204 NA other downstream 1787674 38441166 ~ 38441734 (+)
G254445 NA other downstream 1946995 38600487 ~ 38600866 (+)
G254816 NA other downstream 2190018 38843510 ~ 38844556 (+)

Expression


Co-expression Network