Gene
RNA
| Item | Value |
|---|---|
| gene id | G251876 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 36657928 ~ 36658161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110507518 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU287192 | True | 234 | lncRNA | 0.47 | 1 | 36657928 | 36658161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rcc1 | rcc1 | coding | upstream | 270712 | 36381470 ~ 36387216 (+) |
| phactr4b | LOC106584362 | coding | upstream | 289612 | 36317313 ~ 36368316 (+) |
| LOC110519762 | LOC106584688 | coding | upstream | 356359 | 36293824 ~ 36301569 (+) |
| LOC110519702 | LOC106584341 | coding | upstream | 395961 | 36172193 ~ 36262289 (+) |
| serinc2l | LOC106584332 | coding | upstream | 513341 | 36125327 ~ 36144587 (+) |
| LOC110519936 | LOC106586041 | coding | downstream | 760945 | 37419106 ~ 37424336 (+) |
| LOC110519939 | LOC106604981 | coding | downstream | 827422 | 37428004 ~ 37489579 (+) |
| si:ch211-184m13.4 | LOC106586045 | coding | downstream | 1030627 | 37688788 ~ 37691898 (+) |
| LOC110519942 | LOC106586050 | coding | downstream | 1090534 | 37748695 ~ 37756709 (+) |
| LOC110519944 | LOC106586047 | coding | downstream | 1576182 | 38234343 ~ 38250022 (+) |
| G251871 | NA | non-coding | upstream | 2313 | 36655282 ~ 36655615 (+) |
| G251869 | NA | non-coding | upstream | 4436 | 36653262 ~ 36653492 (+) |
| G251840 | NA | non-coding | upstream | 46614 | 36610884 ~ 36611314 (+) |
| G251835 | NA | non-coding | upstream | 61056 | 36596666 ~ 36596872 (+) |
| G251832 | NA | non-coding | upstream | 64080 | 36593638 ~ 36593848 (+) |
| G251881 | NA | non-coding | downstream | 6596 | 36664757 ~ 36681878 (+) |
| G251860 | NA | non-coding | downstream | 36879 | 36695040 ~ 36766699 (+) |
| G251914 | NA | non-coding | downstream | 76365 | 36734526 ~ 36749257 (+) |
| G251938 | NA | non-coding | downstream | 109251 | 36767412 ~ 36772802 (+) |
| G251999 | NA | non-coding | downstream | 219592 | 36877753 ~ 36878007 (+) |
| G251845 | zdhhc18 | other | upstream | 30386 | 36623610 ~ 36627542 (+) |
| G251773 | NA | other | upstream | 132755 | 36511574 ~ 36579307 (+) |
| LOC110519579 | gmeb1 | other | upstream | 1436556 | 35203647 ~ 35221874 (+) |
| rab42b | rab42 | other | upstream | 1484465 | 35153546 ~ 35173463 (+) |
| G249323 | NA | other | upstream | 2237316 | 34419890 ~ 34420612 (+) |
| G253299 | NA | other | downstream | 1068787 | 37726948 ~ 37727338 (+) |
| G253834 | LOC100136012 | other | downstream | 1434161 | 38092322 ~ 38092734 (+) |
| G254204 | NA | other | downstream | 1783005 | 38441166 ~ 38441734 (+) |
| G254445 | NA | other | downstream | 1942326 | 38600487 ~ 38600866 (+) |
| G254816 | NA | other | downstream | 2185349 | 38843510 ~ 38844556 (+) |
