G251860


Basic Information

Item Value
gene id G251860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36695040 ~ 36766699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU287173
GCATGTAAGACCAACTCTTCACAAACTTTATTCatgaaatgtaaaaaacacaTTTAACAGTTGATTTTGCTGATCTGCAAAGGGATTCATACCCAATGTACACACCTTATAGACTGAAGGGCTGACCAAACTGCCCCACACCAGGGTATTTCTCATTTCAATATGTAAATAATTATCTGTAGTCCAGAGCTCCTGGATTTGTCCATCTTTTTCACTGGCAGAATAAGAGATCAACATTTGCATCCAACTAAACAACACACTGTAGTCTGTACTAACACTAGCATTATAAACCAGCCACAAAGCCAAGGATATATCAATTCAAACTCTTAACCCAGATTGATCCAATTCTTGGATTGTGTGGTAAGAAGCAGTTGATTTGGATTCTATTTGCAGACTGATGCTTCTAACCctttctccaccctcctctcctctctatataacCAGAGGCAGCCATATCAAGATAAAAGTTATTTACGTGTTCAGTCAAAGAGGGAAAGAAGAATAGCATTTGGTGCtgcctcttat

Function

NR:

description
ras-related protein Rab-39B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU287173 True 525 lncRNA 0.38 2 36695040 36766699

Neighbor

gene id symbol gene type direction distance location
LOC110519932 LOC106591969 coding upstream 35487 36657467 ~ 36659553 (+)
rcc1 rcc1 coding upstream 307824 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 326724 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 393471 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 433073 36172193 ~ 36262289 (+)
LOC110519936 LOC106586041 coding downstream 652407 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 718884 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 922089 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 981996 37748695 ~ 37756709 (+)
LOC110519944 LOC106586047 coding downstream 1467644 38234343 ~ 38250022 (+)
G251881 NA non-coding upstream 13162 36664757 ~ 36681878 (+)
G251876 NA non-coding upstream 36879 36657928 ~ 36658161 (+)
G251871 NA non-coding upstream 39425 36655282 ~ 36655615 (+)
G251869 NA non-coding upstream 41548 36653262 ~ 36653492 (+)
G251840 NA non-coding upstream 83726 36610884 ~ 36611314 (+)
G251938 NA non-coding downstream 713 36767412 ~ 36772802 (+)
G251999 NA non-coding downstream 111054 36877753 ~ 36878007 (+)
G252008 NA non-coding downstream 121491 36888190 ~ 36906601 (+)
G252083 NA non-coding downstream 248055 37014754 ~ 37015310 (+)
G252101 NA non-coding downstream 288060 37054759 ~ 37065840 (+)
G251845 zdhhc18 other upstream 67498 36623610 ~ 36627542 (+)
G251773 NA other upstream 169867 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 1473668 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1521577 35153546 ~ 35173463 (+)
G249323 NA other upstream 2274428 34419890 ~ 34420612 (+)
G253299 NA other downstream 960249 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1325623 38092322 ~ 38092734 (+)
G254204 NA other downstream 1674467 38441166 ~ 38441734 (+)
G254445 NA other downstream 1833788 38600487 ~ 38600866 (+)
G254816 NA other downstream 2076811 38843510 ~ 38844556 (+)

Expression


Co-expression Network