G252284



Basic Information


Item Value
gene id G252284
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36745040 ~ 36782278 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU287640
tttaaaaatacctaaagttgtattacaaaagtagtttgaaatattttggcaaagtttataggcaacttttgaaatgttttgtagtgacgttgtgttttggaaagctgtttttttcCGGATCAAAcctgctttataaatggacattttgggtatacatggacggaattaatcgaaaaaaaggaccaattgtgatgtttatgggacatattggagtgccaacaaagaagctcgtcaaaggtaatgcatggtaagtaacattttatataaggtagcattg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU287640 True 277 lncRNA 0.32 2 36745040 36782278

Neighbor


gene id symbol gene type direction distance location
LOC110519934 gpn2 coding downstream 34131 36695035 ~ 36710909 (-)
LOC110519933 NA coding downstream 58914 36664729 ~ 36686126 (-)
LOC110519931 pigv coding downstream 80795 36659224 ~ 36664245 (-)
LOC110519930 LOC106584694 coding downstream 101835 36636329 ~ 36643205 (-)
zdhhc18a zdhhc18 coding downstream 115910 36611815 ~ 36629130 (-)
LOC110504063 serpind1 coding upstream 100036 36882314 ~ 36906191 (-)
LOC110519937 zic2 coding upstream 627990 37410268 ~ 37416025 (-)
clybl clybl coding upstream 661357 37443635 ~ 37641452 (-)
LOC118944514 NA coding upstream 906497 37688775 ~ 37692204 (-)
LOC110519943 LOC106586049 coding upstream 1032431 37814709 ~ 38062756 (-)
G252237 NA non-coding downstream 85988 36658676 ~ 36659052 (-)
G252136 NA non-coding downstream 139386 36604263 ~ 36605654 (-)
G252260 NA non-coding downstream 152961 36591640 ~ 36592079 (-)
G252255 NA non-coding downstream 159568 36585238 ~ 36585472 (-)
G252355 NA non-coding upstream 149730 36932008 ~ 36932659 (-)
G252401 NA non-coding upstream 174006 36956284 ~ 37025688 (-)
G252462 NA non-coding upstream 265185 37047463 ~ 37049953 (-)
G252486 NA non-coding upstream 307954 37090232 ~ 37090679 (-)
gpatch3 gpatch3 other downstream 11600 36731832 ~ 36754332 (-)
G251681 NA other downstream 387069 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 600468 36140112 ~ 36144572 (-)
G249990 NA other downstream 1848744 34895958 ~ 34896296 (-)
G249978 NA other downstream 1855086 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 2616983 39399261 ~ 39508811 (-)
G255911 NA other upstream 2862293 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 3036370 39818648 ~ 39818980 (-)
G256616 NA other upstream 3540228 40322506 ~ 40322898 (-)
G256632 NA other upstream 3552932 40335210 ~ 40335440 (-)

Expression



Co-expression Network