G252676



Basic Information


Item Value
gene id G252676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37188250 ~ 37191433 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU288065
tgtaacggttttctttatgagaaggagagtcggaccaaaatgcggcgtgtagattacgatccatgtttattgtgactatagcaacacgaatctaaatacaaacagtgcaaaataataaacgtaatgaaaaccgaaacagcctaaactggtgcaaactaacactaaggacacaaaggacaatcacccacgacaaactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccacttcagacagccatagacttagctagaacaccccactagctacaatccccataaataca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU288065 True 328 lncRNA 0.41 2 37188250 37191433

Neighbor


gene id symbol gene type direction distance location
LOC110504063 serpind1 coding downstream 295714 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 433918 36731832 ~ 36754332 (-)
LOC110519934 gpn2 coding downstream 477341 36695035 ~ 36710909 (-)
LOC110519933 NA coding downstream 502124 36664729 ~ 36686126 (-)
LOC110519931 pigv coding downstream 524005 36659224 ~ 36664245 (-)
LOC110519937 zic2 coding upstream 218835 37410268 ~ 37416025 (-)
clybl clybl coding upstream 252202 37443635 ~ 37641452 (-)
LOC118944514 NA coding upstream 497342 37688775 ~ 37692204 (-)
LOC110519943 LOC106586049 coding upstream 623276 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 1072365 38263798 ~ 38401288 (-)
G252515 NA non-coding downstream 77257 37110773 ~ 37110993 (-)
G252507 NA non-coding downstream 82545 37105474 ~ 37105705 (-)
G252496 NA non-coding downstream 89877 37097651 ~ 37098373 (-)
G252486 NA non-coding downstream 97571 37090232 ~ 37090679 (-)
G252462 NA non-coding downstream 138297 37047463 ~ 37049953 (-)
G252718 NA non-coding upstream 82636 37274069 ~ 37274274 (-)
G252745 NA non-coding upstream 99626 37291059 ~ 37291318 (-)
G252756 NA non-coding upstream 106331 37297764 ~ 37297985 (-)
G252760 NA non-coding upstream 108573 37300006 ~ 37300228 (-)
G252763 NA non-coding upstream 111956 37303389 ~ 37303624 (-)
G251681 NA other downstream 830279 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1043678 36140112 ~ 36144572 (-)
G249990 NA other downstream 2291954 34895958 ~ 34896296 (-)
G249978 NA other downstream 2298296 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 2207828 39399261 ~ 39508811 (-)
G255911 NA other upstream 2453138 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2627215 39818648 ~ 39818980 (-)
G256616 NA other upstream 3131073 40322506 ~ 40322898 (-)
G256632 NA other upstream 3143777 40335210 ~ 40335440 (-)

Expression



Co-expression Network