G252727


Basic Information

Item Value
gene id G252727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37278693 ~ 37278910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU288119
CACAATAtactggctgtatggacggggacagtatattcGGAGAGAGATATGATTCCGtcaaacagagtatgttacagtccctcgtgtctctctggaaggagatccttgcCATGAGCTTGTTTACTTTATTGTCCACGATTGAACATTAACGAGTAATGTACCCGGCTGTAGGTAATaatgaaaaaaaatgtatgcGCAAATAATGTGAGAAATAACAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103362331

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU288119 True 218 lncRNA 0.40 1 37278693 37278910

Neighbor

gene id symbol gene type direction distance location
LOC110519932 LOC106591969 coding upstream 619140 36657467 ~ 36659553 (+)
rcc1 rcc1 coding upstream 891477 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 910377 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 977124 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 1016726 36172193 ~ 36262289 (+)
LOC110519936 LOC106586041 coding downstream 140196 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 206673 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 409878 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 469785 37748695 ~ 37756709 (+)
LOC110519944 LOC106586047 coding downstream 955433 38234343 ~ 38250022 (+)
G252725 NA non-coding upstream 531 37277948 ~ 37278162 (+)
G252554 NA non-coding upstream 117165 37160998 ~ 37161528 (+)
G252495 NA non-coding upstream 180547 37097698 ~ 37098146 (+)
G252101 NA non-coding upstream 212853 37054759 ~ 37065840 (+)
G252083 NA non-coding upstream 263383 37014754 ~ 37015310 (+)
G252751 NA non-coding downstream 14905 37293815 ~ 37294015 (+)
G252818 NA non-coding downstream 79586 37358496 ~ 37359033 (+)
G252822 NA non-coding downstream 84787 37363697 ~ 37363921 (+)
G252824 NA non-coding downstream 86395 37365305 ~ 37365537 (+)
G252825 NA non-coding downstream 88645 37367555 ~ 37367897 (+)
G251845 zdhhc18 other upstream 651151 36623610 ~ 36627542 (+)
G251773 NA other upstream 753520 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 2057321 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 2105230 35153546 ~ 35173463 (+)
G249323 NA other upstream 2858081 34419890 ~ 34420612 (+)
G253299 NA other downstream 448038 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 813412 38092322 ~ 38092734 (+)
G254204 NA other downstream 1162256 38441166 ~ 38441734 (+)
G254445 NA other downstream 1321577 38600487 ~ 38600866 (+)
G254816 NA other downstream 1564600 38843510 ~ 38844556 (+)

Expression


Co-expression Network