G252850



Basic Information


Item Value
gene id G252850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37357733 ~ 37358345 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU288248
TTTTATGGCGGTCATAAAATACGCTGCTTCTATGCTCTGTAATGTTCAAGATTGGAATGTAAACATGGAACACAGAGAGACCCTTGGACATCAAAAGtttgaataattaaacaatatttctatttttgagaatgtgggagtgGACACTTATTAAGGGACAGTCATGATGAGTGTGTTTCATGAGGATGGTGATCTCATGAGGAAAAGAAACACTCATTACTCTGTCTTTGGTTGTGTACACTTCTTAATGATGGggtttacatctaaatattgtgGAACGTATATGATTAAACATTAAGCTATTTGTGAAaacatgtaatgtgatgttaaccttcTAAATGAGCAAATATGGGTTAAAGTTAACCAAGTCAGTGGTCACGCCCAATTGAACATAGACATTAAGTCGGTGTCACGGACCGCCCTTTTCTCAGTGAATATAAATCCCACTCCTGACGAAATGACATTCGACTAGAAAACATGGAGATGACgttacatgttgaaatggttaaGAACTACAACTGTATAGGCCCAGGAGAccatttttcctagccaccgtgcttctacacctgcattgcttgctttttggggttttaggctgggtttctgtacagca

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU288248 True 613 lncRNA 0.38 1 37357733 37358345

Neighbor


gene id symbol gene type direction distance location
LOC110504063 serpind1 coding downstream 465197 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 603401 36731832 ~ 36754332 (-)
LOC110519934 gpn2 coding downstream 646824 36695035 ~ 36710909 (-)
LOC110519933 NA coding downstream 671607 36664729 ~ 36686126 (-)
LOC110519931 pigv coding downstream 693488 36659224 ~ 36664245 (-)
LOC110519937 zic2 coding upstream 51923 37410268 ~ 37416025 (-)
clybl clybl coding upstream 85290 37443635 ~ 37641452 (-)
LOC118944514 NA coding upstream 330430 37688775 ~ 37692204 (-)
LOC110519943 LOC106586049 coding upstream 456364 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 905453 38263798 ~ 38401288 (-)
G252849 NA non-coding downstream 2142 37355358 ~ 37355591 (-)
G252832 NA non-coding downstream 4362 37332758 ~ 37353371 (-)
G252803 NA non-coding downstream 27225 37330211 ~ 37330508 (-)
G252802 NA non-coding downstream 27661 37329828 ~ 37330072 (-)
G252778 NA non-coding downstream 43953 37313159 ~ 37313780 (-)
G252853 NA non-coding upstream 6281 37364626 ~ 37364847 (-)
G252854 NA non-coding upstream 7556 37365901 ~ 37366135 (-)
G252856 NA non-coding upstream 8927 37367272 ~ 37367473 (-)
G252874 NA non-coding upstream 30880 37389225 ~ 37389514 (-)
G253027 NA non-coding upstream 35866 37394211 ~ 37394429 (-)
G251681 NA other downstream 999762 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1213161 36140112 ~ 36144572 (-)
G249990 NA other downstream 2461437 34895958 ~ 34896296 (-)
G249978 NA other downstream 2467779 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 2040916 39399261 ~ 39508811 (-)
G255911 NA other upstream 2286226 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2460303 39818648 ~ 39818980 (-)
G256616 NA other upstream 2964161 40322506 ~ 40322898 (-)
G256632 NA other upstream 2976865 40335210 ~ 40335440 (-)

Expression



Co-expression Network