G253076


Basic Information

Item Value
gene id G253076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37483179 ~ 37484517 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU288492
ggatttttttccaacagttgtttacagacagattatttagcttttatttcactgtatcacaattccagtgggtcagaagttgacttacactaagttgactgtgcctttaaacagcttggaaaattccagaaaattatgtcatggctttagaagtttctgataggccttgaaatacatccacaggtacacctccaattgactcaaataatgtcaattagcctatcttcaaactcagtgcctctttgcttgacatcatgggaaaatcaaaagaaatcagccaagacctcagaaaaaagactgtggacctccacaagtctggttcatccttgggagcaatttccaaacacctgaaggtaccacgttcatctgtacaaacaatagtacgcaagtataaacatcatgggaccacgcagctgtactttggtgtgaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagatcctggaggaaacaggaacgaaagtatctatatccacagtaaaacgagtcctatatcgacataacctgaaaagtcgctcagcaaggaagaagccactgctccaaacccgccattaaaaagcctgactatgcacatggggacaaagatcgtacatttggagaaatatcctctggtttgatgaaacaaaaatagaactgtttggccataatgaccatcgttatatttggaggaaaaagggggaggctttgtaagccgaagaacaccatcccaactgtgaagcacggggatggcagcttCATGTTgtttgggtgctttgctgcaggagggactggtgcacttcacaaaatagatggcaaagtgtgtgcgagcaaggaggcctacaaatctgactctgttacaccagctttgtcaggaggaatgtgccaaaattcccccaacttattgtgggaagtttgtcgaaggctacccgaaacgtttgtcccaagttaaagcatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacttctgacttcaactgtatttatagcTTTGTTTGTGTTCTATGTCCTGTGTTTTAGATGTTTTTATTAGGTGTGCTTGCTGAAGGCATACTTCagactttttattattattatttagcaCGCTACTCCTCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU288492 True 1142 lncRNA 0.41 2 37483179 37484517

Neighbor

gene id symbol gene type direction distance location
LOC110519937 zic2 coding downstream 67918 37410268 ~ 37416025 (-)
LOC110504063 serpind1 coding downstream 590643 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 728847 36731832 ~ 36754332 (-)
LOC110519934 gpn2 coding downstream 772270 36695035 ~ 36710909 (-)
LOC110519933 NA coding downstream 797053 36664729 ~ 36686126 (-)
LOC118944514 NA coding upstream 204258 37688775 ~ 37692204 (-)
LOC110519943 LOC106586049 coding upstream 330192 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 779281 38263798 ~ 38401288 (-)
LOC110519947 LOC106586044 coding upstream 1292421 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 1311176 38795693 ~ 39140087 (-)
G253038 NA non-coding downstream 73004 37409948 ~ 37410175 (-)
G253029 NA non-coding downstream 87692 37395208 ~ 37395487 (-)
G253027 NA non-coding downstream 88750 37394211 ~ 37394429 (-)
G252874 NA non-coding downstream 93665 37389225 ~ 37389514 (-)
G253139 NA non-coding upstream 94292 37578809 ~ 37580288 (-)
G253183 NA non-coding upstream 161442 37645959 ~ 37646248 (-)
G253298 NA non-coding upstream 242119 37726636 ~ 37726856 (-)
G253301 NA non-coding upstream 243883 37728400 ~ 37728600 (-)
G251681 NA other downstream 1125208 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1338607 36140112 ~ 36144572 (-)
G249990 NA other downstream 2586883 34895958 ~ 34896296 (-)
G249978 NA other downstream 2593225 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 1914744 39399261 ~ 39508811 (-)
G255911 NA other upstream 2160054 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2334131 39818648 ~ 39818980 (-)
G256616 NA other upstream 2837989 40322506 ~ 40322898 (-)
G256632 NA other upstream 2850693 40335210 ~ 40335440 (-)

Expression


Co-expression Network