G253313


Basic Information

Item Value
gene id G253313
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37743965 ~ 37744432 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU288736
ctcagaatttgcagcccaaataaatgcttcacagagttcaactaaagacacatctcaacatcaactgttcagaggagcctgcgtgaataaggccttcatggtcaagttgctgcaaataaaccactactaaaagaaaccaataataagaagagacttgcttgggccaagaaacatgagcaatagacatgagtccaaatttgagatttttggttccaaccgccatgtctttgacaatgacccaacacacctccaggctatgtaagggctatttgaccaagaaggagagtgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU288736 True 291 lncRNA 0.42 2 37743965 37744432

Neighbor

gene id symbol gene type direction distance location
si:ch211-184m13.4 LOC106586045 coding upstream 52067 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 254395 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 319629 37419106 ~ 37424336 (+)
LOC110519932 LOC106591969 coding upstream 1084412 36657467 ~ 36659553 (+)
rcc1 rcc1 coding upstream 1356749 36381470 ~ 36387216 (+)
LOC110519942 LOC106586050 coding downstream 4263 37748695 ~ 37756709 (+)
LOC110519944 LOC106586047 coding downstream 489911 38234343 ~ 38250022 (+)
LOC110519946 NA coding downstream 891514 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 1427465 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1649209 39393641 ~ 39393713 (+)
G253022 NA non-coding upstream 105288 37638313 ~ 37638677 (+)
G252894 NA non-coding upstream 345546 37398220 ~ 37398419 (+)
G252891 NA non-coding upstream 348244 37395515 ~ 37395721 (+)
G252866 NA non-coding upstream 359160 37384600 ~ 37384805 (+)
G253316 NA non-coding downstream 16354 37760786 ~ 37761394 (+)
G253392 NA non-coding downstream 58176 37802608 ~ 37802882 (+)
G253393 NA non-coding downstream 58502 37802934 ~ 37803493 (+)
G253412 NA non-coding downstream 70325 37814757 ~ 37816542 (+)
G253299 NA other upstream 16627 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1116423 36623610 ~ 36627542 (+)
G251773 NA other upstream 1218792 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 2522593 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 2570502 35153546 ~ 35173463 (+)
G253834 LOC100136012 other downstream 347890 38092322 ~ 38092734 (+)
G254204 NA other downstream 696734 38441166 ~ 38441734 (+)
G254445 NA other downstream 856055 38600487 ~ 38600866 (+)
G254816 NA other downstream 1099078 38843510 ~ 38844556 (+)
LOC110519960 LOC106586058 other downstream 1914627 39658753 ~ 39668297 (+)

Expression


Co-expression Network