G253333



Basic Information


Item Value
gene id G253333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37761458 ~ 37761870 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU288757
tcaaaatcaaaagtaacagtcagtatttggtgtggccaacagatgcattaagcactgcagtgcatttcctcctcatggactgcaccagatttgccagttcttgctgtgagatgttaccccacactTCCACCAAGGGACCTGCAAGTtctctgacatttctggggggaatggtcctagccctcaccctccgattcaacaggttccagacgtgctcaatggtattgagatccgggctcttcgctggccatggcagaacactgacatttctgccttgcaggaaatcatgcacagaacaagcagtatggctggtggcattgtcatgctggagggtcatgtcaggatgagcctgcaggaaaggtaccacatgagggaggaggttgtcttccctgtaacgcacagcgttgagatttcct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU288757 True 413 lncRNA 0.51 1 37761458 37761870

Neighbor


gene id symbol gene type direction distance location
LOC118944514 NA coding downstream 69453 37688775 ~ 37692204 (-)
clybl clybl coding downstream 120006 37443635 ~ 37641452 (-)
LOC110519937 zic2 coding downstream 346197 37410268 ~ 37416025 (-)
LOC110504063 serpind1 coding downstream 868922 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 1007126 36731832 ~ 36754332 (-)
LOC110519943 LOC106586049 coding upstream 52839 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 501928 38263798 ~ 38401288 (-)
LOC110519947 LOC106586044 coding upstream 1015068 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 1033823 38795693 ~ 39140087 (-)
LOC110519952 snx25 coding upstream 1470012 39231882 ~ 39252150 (-)
G253331 NA non-coding downstream 4748 37748664 ~ 37756710 (-)
G253301 NA non-coding downstream 32858 37728400 ~ 37728600 (-)
G253298 NA non-coding downstream 34602 37726636 ~ 37726856 (-)
G253183 NA non-coding downstream 115210 37645959 ~ 37646248 (-)
G253340 NA non-coding upstream 7842 37769712 ~ 37769963 (-)
G253345 NA non-coding upstream 10992 37772862 ~ 37773174 (-)
G253400 NA non-coding upstream 44748 37806618 ~ 37806847 (-)
G253793 NA non-coding upstream 304354 38066224 ~ 38066439 (-)
G253812 NA non-coding upstream 317055 38078925 ~ 38079174 (-)
G251681 NA other downstream 1403487 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1616886 36140112 ~ 36144572 (-)
G249990 NA other downstream 2865162 34895958 ~ 34896296 (-)
G249978 NA other downstream 2871504 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 1637391 39399261 ~ 39508811 (-)
G255911 NA other upstream 1882701 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2056778 39818648 ~ 39818980 (-)
G256616 NA other upstream 2560636 40322506 ~ 40322898 (-)
G256632 NA other upstream 2573340 40335210 ~ 40335440 (-)

Expression



Co-expression Network