G253345



Basic Information


Item Value
gene id G253345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37772862 ~ 37773174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU288769
ctcgGACAAAagagagatgctagttctaggtcccaagaaacaaagagatcttctgttggatctcacaattaatcttgatggttgtacagtcatctcaaataaatcTGTGAAAGAcgtcggcattactctggaccctgatctctcttttgacgaacatatcaagaaaatttcaaggacagcttttttccaacttcgtaacattgcaaaaaccagaagctttctgtccaaaaaatgaggcagaaaaatgaatccatgcttttatcacttctagattagattactgcaatgctctactccggctactggataaagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU288769 True 313 lncRNA 0.39 1 37772862 37773174

Neighbor


gene id symbol gene type direction distance location
LOC118944514 NA coding downstream 80857 37688775 ~ 37692204 (-)
clybl clybl coding downstream 131410 37443635 ~ 37641452 (-)
LOC110519937 zic2 coding downstream 357601 37410268 ~ 37416025 (-)
LOC110504063 serpind1 coding downstream 880326 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 1018530 36731832 ~ 36754332 (-)
LOC110519943 LOC106586049 coding upstream 41535 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 490624 38263798 ~ 38401288 (-)
LOC110519947 LOC106586044 coding upstream 1003764 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 1022519 38795693 ~ 39140087 (-)
LOC110519952 snx25 coding upstream 1458708 39231882 ~ 39252150 (-)
G253340 NA non-coding downstream 2899 37769712 ~ 37769963 (-)
G253333 NA non-coding downstream 10992 37761458 ~ 37761870 (-)
G253331 NA non-coding downstream 16152 37748664 ~ 37756710 (-)
G253301 NA non-coding downstream 44262 37728400 ~ 37728600 (-)
G253298 NA non-coding downstream 46006 37726636 ~ 37726856 (-)
G253400 NA non-coding upstream 33444 37806618 ~ 37806847 (-)
G253793 NA non-coding upstream 293050 38066224 ~ 38066439 (-)
G253812 NA non-coding upstream 305751 38078925 ~ 38079174 (-)
G253836 NA non-coding upstream 319229 38092403 ~ 38092795 (-)
G253863 NA non-coding upstream 334161 38107335 ~ 38107740 (-)
G251681 NA other downstream 1414891 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1628290 36140112 ~ 36144572 (-)
G249990 NA other downstream 2876566 34895958 ~ 34896296 (-)
G249978 NA other downstream 2882908 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 1626087 39399261 ~ 39508811 (-)
G255911 NA other upstream 1871397 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2045474 39818648 ~ 39818980 (-)
G256616 NA other upstream 2549332 40322506 ~ 40322898 (-)
G256632 NA other upstream 2562036 40335210 ~ 40335440 (-)

Expression



Co-expression Network