Gene
RNA
| Item | Value |
|---|---|
| gene id | G253418 |
| gene name | LOC106586049 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 37824414 ~ 37841104 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dachshund homolog 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU288844 | True | 507 | lncRNA | 0.49 | 2 | 37824414 | 37841104 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519942 | LOC106586050 | coding | upstream | 68962 | 37748695 ~ 37756709 (+) |
| si:ch211-184m13.4 | LOC106586045 | coding | upstream | 132516 | 37688788 ~ 37691898 (+) |
| LOC110519939 | LOC106604981 | coding | upstream | 334844 | 37428004 ~ 37489579 (+) |
| LOC110519936 | LOC106586041 | coding | upstream | 400078 | 37419106 ~ 37424336 (+) |
| LOC110519932 | LOC106591969 | coding | upstream | 1164861 | 36657467 ~ 36659553 (+) |
| LOC110519944 | LOC106586047 | coding | downstream | 393239 | 38234343 ~ 38250022 (+) |
| LOC110519946 | NA | coding | downstream | 794842 | 38635946 ~ 38760490 (+) |
| LOC110519950 | LOC106586053 | coding | downstream | 1330793 | 39171897 ~ 39214104 (+) |
| trnaf-gaa | NA | coding | downstream | 1552537 | 39393641 ~ 39393713 (+) |
| LOC110519956 | LOC105026395 | coding | downstream | 1767065 | 39608169 ~ 39621078 (+) |
| G253412 | NA | non-coding | upstream | 7872 | 37814757 ~ 37816542 (+) |
| G253393 | NA | non-coding | upstream | 20921 | 37802934 ~ 37803493 (+) |
| G253392 | NA | non-coding | upstream | 21532 | 37802608 ~ 37802882 (+) |
| G253316 | NA | non-coding | upstream | 63020 | 37760786 ~ 37761394 (+) |
| G253496 | NA | non-coding | downstream | 91723 | 37932827 ~ 37933822 (+) |
| G253788 | NA | non-coding | downstream | 223210 | 38064314 ~ 38064525 (+) |
| G253789 | NA | non-coding | downstream | 223521 | 38064625 ~ 38064836 (+) |
| G253791 | NA | non-coding | downstream | 224616 | 38065720 ~ 38065929 (+) |
| G253800 | NA | non-coding | downstream | 230638 | 38071742 ~ 38071994 (+) |
| G253299 | NA | other | upstream | 97076 | 37726948 ~ 37727338 (+) |
| G251845 | zdhhc18 | other | upstream | 1196872 | 36623610 ~ 36627542 (+) |
| G251773 | NA | other | upstream | 1299241 | 36511574 ~ 36579307 (+) |
| LOC110519579 | gmeb1 | other | upstream | 2603042 | 35203647 ~ 35221874 (+) |
| rab42b | rab42 | other | upstream | 2650951 | 35153546 ~ 35173463 (+) |
| G253834 | LOC100136012 | other | downstream | 251218 | 38092322 ~ 38092734 (+) |
| G254204 | NA | other | downstream | 600062 | 38441166 ~ 38441734 (+) |
| G254445 | NA | other | downstream | 759383 | 38600487 ~ 38600866 (+) |
| G254816 | NA | other | downstream | 1002406 | 38843510 ~ 38844556 (+) |
| LOC110519960 | LOC106586058 | other | downstream | 1817955 | 39658753 ~ 39668297 (+) |
