Gene
RNA
| Item | Value |
|---|---|
| gene id | G253836 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 38092403 ~ 38092795 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU289270 | True | 393 | lncRNA | 0.51 | 1 | 38092403 | 38092795 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519943 | LOC106586049 | coding | downstream | 29647 | 37814709 ~ 38062756 (-) |
| LOC118944514 | NA | coding | downstream | 400398 | 37688775 ~ 37692204 (-) |
| clybl | clybl | coding | downstream | 450951 | 37443635 ~ 37641452 (-) |
| LOC110519937 | zic2 | coding | downstream | 677142 | 37410268 ~ 37416025 (-) |
| LOC110504063 | serpind1 | coding | downstream | 1199867 | 36882314 ~ 36906191 (-) |
| LOC110519945 | LOC105007140 | coding | upstream | 171003 | 38263798 ~ 38401288 (-) |
| LOC110519947 | LOC106586044 | coding | upstream | 684143 | 38776852 ~ 38778156 (-) |
| LOC110519948 | mycbp2 | coding | upstream | 702898 | 38795693 ~ 39140087 (-) |
| LOC110519952 | snx25 | coding | upstream | 1139087 | 39231882 ~ 39252150 (-) |
| LOC110519953 | LOC106586054 | coding | upstream | 1165996 | 39258791 ~ 39269466 (-) |
| G253812 | NA | non-coding | downstream | 13229 | 38078925 ~ 38079174 (-) |
| G253793 | NA | non-coding | downstream | 25964 | 38066224 ~ 38066439 (-) |
| G253400 | NA | non-coding | downstream | 285556 | 37806618 ~ 37806847 (-) |
| G253345 | NA | non-coding | downstream | 319229 | 37772862 ~ 37773174 (-) |
| G253340 | NA | non-coding | downstream | 322440 | 37769712 ~ 37769963 (-) |
| G253863 | NA | non-coding | upstream | 14540 | 38107335 ~ 38107740 (-) |
| G253884 | NA | non-coding | upstream | 34869 | 38127664 ~ 38127874 (-) |
| G253886 | NA | non-coding | upstream | 35982 | 38128777 ~ 38128979 (-) |
| G253906 | NA | non-coding | upstream | 46161 | 38138956 ~ 38139207 (-) |
| G253908 | NA | non-coding | upstream | 47257 | 38140052 ~ 38140274 (-) |
| gpatch3 | gpatch3 | other | downstream | 1358963 | 36731832 ~ 36754332 (-) |
| G251681 | NA | other | downstream | 1734432 | 36357325 ~ 36357971 (-) |
| G251462 | LOC106584332 | other | downstream | 1947831 | 36140112 ~ 36144572 (-) |
| G249990 | NA | other | downstream | 3196107 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 3202449 | 34889506 ~ 34889954 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 1306466 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 1551776 | 39644571 ~ 39645743 (-) |
| G256016 | LOC106581772 | other | upstream | 1725853 | 39818648 ~ 39818980 (-) |
| G256616 | NA | other | upstream | 2229711 | 40322506 ~ 40322898 (-) |
| G256632 | NA | other | upstream | 2242415 | 40335210 ~ 40335440 (-) |
