G254127


Basic Information

Item Value
gene id G254127
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38341359 ~ 38343849 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289569
ctcagtactttgttgaagtatatttggcagcgattacaacctcgagtcttcttgtgtatgacgctacaagcttggcacacctgtgtttggagagtttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagtgtcgctgcacagctattttcagttttggaaaaataacgttcccaaagtaaacagcctatttctcaggaccagatgctagaatatgcatagaattgacagctggggatagaaaacactctaaagtttccaaaactgtaaaaatattgtctgtgagtataacataactgatactgcaggcaaaagcctgagaaaaatccaatcaggaagtgactcttattttgaaagctctgtgttcctatgcatccctattgaccattgaaagggatatcaaccagattcctttttctatggcttccctaaggtgtctacagcctttagacatagtttcaggcttttattttgatgAATGAGCATGAACGATCACATAAGTGgtcaggtgggggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289569 True 534 lncRNA 0.41 2 38341359 38343849

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 91337 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 585907 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 649461 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 851789 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 917023 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 292097 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 828048 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1049792 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1264320 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1314904 39658753 ~ 39668297 (+)
G254125 NA non-coding upstream 1111 38340035 ~ 38340248 (+)
G254124 NA non-coding upstream 2505 38338604 ~ 38338854 (+)
G254062 NA non-coding upstream 71570 38263818 ~ 38269789 (+)
G254039 NA non-coding upstream 108311 38232827 ~ 38233048 (+)
G254019 NA non-coding upstream 126770 38214305 ~ 38214589 (+)
G254131 NA non-coding downstream 2320 38346169 ~ 38346397 (+)
G254132 NA non-coding downstream 3061 38346910 ~ 38347172 (+)
G254133 NA non-coding downstream 3919 38347768 ~ 38348056 (+)
G254135 NA non-coding downstream 5339 38349188 ~ 38349414 (+)
G254136 NA non-coding downstream 5761 38349610 ~ 38349838 (+)
G253834 LOC100136012 other upstream 248625 38092322 ~ 38092734 (+)
G253299 NA other upstream 614021 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1713817 36623610 ~ 36627542 (+)
G251773 NA other upstream 1816186 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 3119987 35203647 ~ 35221874 (+)
G254204 NA other downstream 97317 38441166 ~ 38441734 (+)
G254445 NA other downstream 256638 38600487 ~ 38600866 (+)
G254816 NA other downstream 499661 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 2096220 40440040 ~ 40452542 (+)

Expression


Co-expression Network