G254133


Basic Information

Item Value
gene id G254133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38347768 ~ 38348056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289576
aacaaggacaacacacctctttccatcattgtatgattttttgtgtgcaaatgaactcatgcttacggacaatgtcaaagtACATGCacaattacacaggtactttcaCAAAACGGATGAGACAAACAACTGgtttcattatccctttcatgccttgcctccagtccacttaccaatatctgaacaagagagcctcattgaaattgcaactAGCGGTTCtctgaaaatgtaatttaatcagaagccaatgacagatttatggattgggctgtgctcagagtttcctgcc

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289576 True 289 lncRNA 0.40 1 38347768 38348056

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 97746 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 592316 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 655870 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 858198 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 923432 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 287890 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 823841 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1045585 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1260113 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1310697 39658753 ~ 39668297 (+)
G254132 NA non-coding upstream 596 38346910 ~ 38347172 (+)
G254131 NA non-coding upstream 1371 38346169 ~ 38346397 (+)
G254127 NA non-coding upstream 3919 38341359 ~ 38343849 (+)
G254125 NA non-coding upstream 7520 38340035 ~ 38340248 (+)
G254124 NA non-coding upstream 8914 38338604 ~ 38338854 (+)
G254135 NA non-coding downstream 1132 38349188 ~ 38349414 (+)
G254136 NA non-coding downstream 1554 38349610 ~ 38349838 (+)
G254137 NA non-coding downstream 2033 38350089 ~ 38350307 (+)
G254138 NA non-coding downstream 2875 38350931 ~ 38351163 (+)
G254141 NA non-coding downstream 8823 38356879 ~ 38357097 (+)
G253834 LOC100136012 other upstream 255034 38092322 ~ 38092734 (+)
G253299 NA other upstream 620430 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1720226 36623610 ~ 36627542 (+)
G251773 NA other upstream 1822595 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 3126396 35203647 ~ 35221874 (+)
G254204 NA other downstream 93110 38441166 ~ 38441734 (+)
G254445 NA other downstream 252431 38600487 ~ 38600866 (+)
G254816 NA other downstream 495454 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 2092013 40440040 ~ 40452542 (+)

Expression


Co-expression Network