G254135


Basic Information

Item Value
gene id G254135
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38349188 ~ 38349414 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289578
ggtggattgagatgccGCTATAAACTGATGGATTTAGATTGGGATTGTTTTTTATCACGTTATTTAGATTGACACACAGGTGCttcaatagactcttaaggagTTGAGGGATGGAGTTCAGACAGGCTACTTTAGAAACTTTCTGAATGGACATAGAGAATAAgcaaactctctctcacacacacacacacacacacacacaaagcctaaAAGGGCCCTTCAATCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289578 True 227 lncRNA 0.41 1 38349188 38349414

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 99166 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 593736 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 657290 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 859618 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 924852 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 286532 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 822483 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1044227 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1258755 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1309339 39658753 ~ 39668297 (+)
G254133 NA non-coding upstream 1132 38347768 ~ 38348056 (+)
G254132 NA non-coding upstream 2016 38346910 ~ 38347172 (+)
G254131 NA non-coding upstream 2791 38346169 ~ 38346397 (+)
G254127 NA non-coding upstream 5339 38341359 ~ 38343849 (+)
G254125 NA non-coding upstream 8940 38340035 ~ 38340248 (+)
G254136 NA non-coding downstream 196 38349610 ~ 38349838 (+)
G254137 NA non-coding downstream 675 38350089 ~ 38350307 (+)
G254138 NA non-coding downstream 1517 38350931 ~ 38351163 (+)
G254141 NA non-coding downstream 7465 38356879 ~ 38357097 (+)
G254144 NA non-coding downstream 9912 38359326 ~ 38359548 (+)
G253834 LOC100136012 other upstream 256454 38092322 ~ 38092734 (+)
G253299 NA other upstream 621850 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1721646 36623610 ~ 36627542 (+)
G251773 NA other upstream 1824015 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 3127816 35203647 ~ 35221874 (+)
G254204 NA other downstream 91752 38441166 ~ 38441734 (+)
G254445 NA other downstream 251073 38600487 ~ 38600866 (+)
G254816 NA other downstream 494096 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 2090655 40440040 ~ 40452542 (+)

Expression


Co-expression Network