G254144


Basic Information

Item Value
gene id G254144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38359326 ~ 38359548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289587
ACCGGAGCCCGTGGGCCATGTGGGGTTGCAGGGTTTTTTAGTACCCCAGTGCTGagactgtgatgtgtgtgtgtgtgtgtgtgtgtgttttgattttGAAttggagtgagaaagagagagcaagagagagcgataCATAGTTTTGGGAGTTTTCCATGTCTCTCCCTGAAGCAGTGACTCTGGGAGAATCTTAAATTGCATACTCGttgcgtcctctctcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289587 True 223 lncRNA 0.48 1 38359326 38359548

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 109304 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 603874 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 667428 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 869756 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 934990 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 276398 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 812349 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1034093 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1248621 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1299205 39658753 ~ 39668297 (+)
G254141 NA non-coding upstream 2229 38356879 ~ 38357097 (+)
G254138 NA non-coding upstream 8163 38350931 ~ 38351163 (+)
G254137 NA non-coding upstream 9019 38350089 ~ 38350307 (+)
G254136 NA non-coding upstream 9488 38349610 ~ 38349838 (+)
G254135 NA non-coding upstream 9912 38349188 ~ 38349414 (+)
G254146 NA non-coding downstream 2130 38361678 ~ 38361914 (+)
G254148 NA non-coding downstream 5710 38365258 ~ 38365461 (+)
G254219 NA non-coding downstream 103808 38463356 ~ 38463788 (+)
G254343 NA non-coding downstream 106071 38465619 ~ 38465892 (+)
G254447 NA non-coding downstream 242810 38602358 ~ 38602616 (+)
G253834 LOC100136012 other upstream 266592 38092322 ~ 38092734 (+)
G253299 NA other upstream 631988 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1731784 36623610 ~ 36627542 (+)
G251773 NA other upstream 1834153 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 3137954 35203647 ~ 35221874 (+)
G254204 NA other downstream 81618 38441166 ~ 38441734 (+)
G254445 NA other downstream 240939 38600487 ~ 38600866 (+)
G254816 NA other downstream 483962 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 2080521 40440040 ~ 40452542 (+)

Expression


Co-expression Network