G254219


Basic Information

Item Value
gene id G254219
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38463356 ~ 38463788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289663
ctatttaccaaatcatgagggcaaaccacacacaagtcagagttagttatcaaagtccatctttaattatatgagctctatcacaaccctgtgactctcagatcaattcagtgtctatcaatgaattctctgagagtcccttccacatttcaactgagatcctttaatagcaaaaaacacacatagtcagacagcatagacataataaatcgttcagctttgtctcccaAACTATGctcttttctcaaactcagaaccataaaccaatcctccatatcaacaggcatatatcaaatccatcctatcttgacaagatcacagagacacactgactggcacacagacattgtggagccaagagatacacgcttgacctctcccctctctccggcccaagcaacttagtcttgacatagaacagatactgcaaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289663 True 433 lncRNA 0.41 1 38463356 38463788

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 213334 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 707904 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 771458 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 973786 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 1039020 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 172158 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 708109 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 929853 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1144381 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1194965 39658753 ~ 39668297 (+)
G254148 NA non-coding upstream 97895 38365258 ~ 38365461 (+)
G254146 NA non-coding upstream 101442 38361678 ~ 38361914 (+)
G254144 NA non-coding upstream 103808 38359326 ~ 38359548 (+)
G254141 NA non-coding upstream 106259 38356879 ~ 38357097 (+)
G254138 NA non-coding upstream 112193 38350931 ~ 38351163 (+)
G254343 NA non-coding downstream 1831 38465619 ~ 38465892 (+)
G254447 NA non-coding downstream 138570 38602358 ~ 38602616 (+)
G254562 NA non-coding downstream 148839 38612627 ~ 38612843 (+)
G254583 NA non-coding downstream 155245 38619033 ~ 38619264 (+)
G254589 NA non-coding downstream 160153 38623941 ~ 38624149 (+)
G254204 NA other upstream 21622 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 370622 38092322 ~ 38092734 (+)
G253299 NA other upstream 736018 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1835814 36623610 ~ 36627542 (+)
G251773 NA other upstream 1938183 36511574 ~ 36579307 (+)
G254445 NA other downstream 136699 38600487 ~ 38600866 (+)
G254816 NA other downstream 379722 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1976281 40440040 ~ 40452542 (+)
G261749 NA other downstream 5788281 44252069 ~ 44252551 (+)

Expression


Co-expression Network