G254553


Basic Information

Item Value
gene id G254553
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38600082 ~ 38600376 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290010
gtatgtatgtactatAGTAGAATGTTATGAACCGACACTGAATCGTAGGAGCTGACTACTAGCTATGTAAAAGTTGGATGAAAGAACGCCTGTGCATTCTCAGGtaagtgctgcttacctgagatgtcaTCATCACACAGTCCTTCTTCGTAGGTGTCCGCTATGACTTCCTTTGTGTCGGAAAGAAAGGCTGAATAATATTGGTTGTAGCCAAACTGACACTCAAAAATGGCCAAAATGGGGGGTGGTTGATAGCGTAATTAAATTGGAGTTCTgttttcaaatacatttaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290010 True 295 lncRNA 0.40 1 38600082 38600376

Neighbor

gene id symbol gene type direction distance location
LOC110519945 LOC105007140 coding downstream 198794 38263798 ~ 38401288 (-)
LOC110519943 LOC106586049 coding downstream 537326 37814709 ~ 38062756 (-)
LOC118944514 NA coding downstream 908077 37688775 ~ 37692204 (-)
clybl clybl coding downstream 958630 37443635 ~ 37641452 (-)
LOC110519937 zic2 coding downstream 1184821 37410268 ~ 37416025 (-)
LOC110519947 LOC106586044 coding upstream 176562 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 195317 38795693 ~ 39140087 (-)
LOC110519952 snx25 coding upstream 631506 39231882 ~ 39252150 (-)
LOC110519953 LOC106586054 coding upstream 658415 39258791 ~ 39269466 (-)
LOC118954848 NA coding upstream 682133 39282509 ~ 39288215 (-)
G254335 NA non-coding downstream 146174 38453581 ~ 38453908 (-)
G254326 NA non-coding downstream 162206 38437543 ~ 38437876 (-)
G254275 NA non-coding downstream 260356 38339469 ~ 38339726 (-)
G254009 NA non-coding downstream 393274 38206590 ~ 38206808 (-)
G254554 NA non-coding upstream 774 38601150 ~ 38601415 (-)
G254556 NA non-coding upstream 3295 38603671 ~ 38603983 (-)
G254557 NA non-coding upstream 4447 38604823 ~ 38605227 (-)
G254723 NA non-coding upstream 134444 38734820 ~ 38737167 (-)
G254729 NA non-coding upstream 151216 38751592 ~ 38751956 (-)
gpatch3 gpatch3 other downstream 1866642 36731832 ~ 36754332 (-)
G251681 NA other downstream 2242111 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 2455510 36140112 ~ 36144572 (-)
G249990 NA other downstream 3703786 34895958 ~ 34896296 (-)
G249978 NA other downstream 3710128 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 798885 39399261 ~ 39508811 (-)
G255911 NA other upstream 1044195 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 1218272 39818648 ~ 39818980 (-)
G256616 NA other upstream 1722130 40322506 ~ 40322898 (-)
G256632 NA other upstream 1734834 40335210 ~ 40335440 (-)

Expression


Co-expression Network