G254554



Basic Information


Item Value
gene id G254554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38601150 ~ 38601415 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU290011
gccttatatgcgtcgcggaagttagagtaactatgatccaaggtctttccacccctggttgcgcaatcgatatgctgatacaatttagggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctccggataaatggtttccagtttgcaaagagtcaaataaagttcattcagagccatcgatgtgtctgcttggggggggatatatacggctgtgattataatcgaagagaattctcttggtag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU290011 True 266 lncRNA 0.43 1 38601150 38601415

Neighbor


gene id symbol gene type direction distance location
LOC110519945 LOC105007140 coding downstream 199862 38263798 ~ 38401288 (-)
LOC110519943 LOC106586049 coding downstream 538394 37814709 ~ 38062756 (-)
LOC118944514 NA coding downstream 909145 37688775 ~ 37692204 (-)
clybl clybl coding downstream 959698 37443635 ~ 37641452 (-)
LOC110519937 zic2 coding downstream 1185889 37410268 ~ 37416025 (-)
LOC110519947 LOC106586044 coding upstream 175523 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 194278 38795693 ~ 39140087 (-)
LOC110519952 snx25 coding upstream 630467 39231882 ~ 39252150 (-)
LOC110519953 LOC106586054 coding upstream 657376 39258791 ~ 39269466 (-)
LOC118954848 NA coding upstream 681094 39282509 ~ 39288215 (-)
G254553 NA non-coding downstream 774 38600082 ~ 38600376 (-)
G254335 NA non-coding downstream 147242 38453581 ~ 38453908 (-)
G254326 NA non-coding downstream 163274 38437543 ~ 38437876 (-)
G254275 NA non-coding downstream 261424 38339469 ~ 38339726 (-)
G254556 NA non-coding upstream 2256 38603671 ~ 38603983 (-)
G254557 NA non-coding upstream 3408 38604823 ~ 38605227 (-)
G254723 NA non-coding upstream 133405 38734820 ~ 38737167 (-)
G254729 NA non-coding upstream 150177 38751592 ~ 38751956 (-)
G254730 NA non-coding upstream 153523 38754938 ~ 38755884 (-)
gpatch3 gpatch3 other downstream 1867710 36731832 ~ 36754332 (-)
G251681 NA other downstream 2243179 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 2456578 36140112 ~ 36144572 (-)
G249990 NA other downstream 3704854 34895958 ~ 34896296 (-)
G249978 NA other downstream 3711196 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 797846 39399261 ~ 39508811 (-)
G255911 NA other upstream 1043156 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 1217233 39818648 ~ 39818980 (-)
G256616 NA other upstream 1721091 40322506 ~ 40322898 (-)
G256632 NA other upstream 1733795 40335210 ~ 40335440 (-)

Expression



Co-expression Network