G254562


Basic Information

Item Value
gene id G254562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38612627 ~ 38612843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290019
CTGATTTAAGACTGAAGATTCACATGCAGCACAACTCTTTGTCGAACATATTTTAAATGCAACATCGTATCATCATTACAAAAAAGCAATACAGTAAACATTTAATAAACATTTCCATAAATGTCATGATCTAACAAAACTATTTGGACCCATCAATTCACTTAAACAGGCATTCACATTCATCTTCTAGTCTCAGGCCAGGTTTTCAGCACAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290019 True 217 lncRNA 0.34 1 38612627 38612843

Neighbor

gene id symbol gene type direction distance location
LOC110519944 LOC106586047 coding upstream 362605 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 857175 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 920729 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1123057 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 1188291 37419106 ~ 37424336 (+)
LOC110519946 NA coding downstream 23103 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 559054 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 780798 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 995326 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 1045910 39658753 ~ 39668297 (+)
G254447 NA non-coding upstream 10011 38602358 ~ 38602616 (+)
G254343 NA non-coding upstream 146735 38465619 ~ 38465892 (+)
G254219 NA non-coding upstream 148839 38463356 ~ 38463788 (+)
G254148 NA non-coding upstream 247166 38365258 ~ 38365461 (+)
G254146 NA non-coding upstream 250713 38361678 ~ 38361914 (+)
G254583 NA non-coding downstream 6190 38619033 ~ 38619264 (+)
G254589 NA non-coding downstream 11098 38623941 ~ 38624149 (+)
G254570 NA non-coding downstream 147865 38760708 ~ 38764081 (+)
G254735 NA non-coding downstream 151494 38764337 ~ 38764657 (+)
G254736 NA non-coding downstream 152018 38764861 ~ 38765123 (+)
G254445 NA other upstream 11761 38600487 ~ 38600866 (+)
G254204 NA other upstream 170893 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 519893 38092322 ~ 38092734 (+)
G253299 NA other upstream 885289 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1985085 36623610 ~ 36627542 (+)
G254816 NA other downstream 230667 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1827226 40440040 ~ 40452542 (+)
G261749 NA other downstream 5639226 44252069 ~ 44252551 (+)
G262037 NA other downstream 5907576 44520419 ~ 44525408 (+)

Expression


Co-expression Network