Gene
RNA
| Item | Value |
|---|---|
| gene id | G254729 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 38751592 ~ 38751956 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LIM domain only protein 7-like isoform X14 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU290216 | True | 332 | lncRNA | 0.61 | 2 | 38751592 | 38751956 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519945 | LOC105007140 | coding | downstream | 350304 | 38263798 ~ 38401288 (-) |
| LOC110519943 | LOC106586049 | coding | downstream | 688836 | 37814709 ~ 38062756 (-) |
| LOC118944514 | NA | coding | downstream | 1059587 | 37688775 ~ 37692204 (-) |
| clybl | clybl | coding | downstream | 1110140 | 37443635 ~ 37641452 (-) |
| LOC110519937 | zic2 | coding | downstream | 1336331 | 37410268 ~ 37416025 (-) |
| LOC110519947 | LOC106586044 | coding | upstream | 24982 | 38776852 ~ 38778156 (-) |
| LOC110519948 | mycbp2 | coding | upstream | 43737 | 38795693 ~ 39140087 (-) |
| LOC110519952 | snx25 | coding | upstream | 479926 | 39231882 ~ 39252150 (-) |
| LOC110519953 | LOC106586054 | coding | upstream | 506835 | 39258791 ~ 39269466 (-) |
| LOC118954848 | NA | coding | upstream | 530553 | 39282509 ~ 39288215 (-) |
| G254723 | NA | non-coding | downstream | 14425 | 38734820 ~ 38737167 (-) |
| G254557 | NA | non-coding | downstream | 146365 | 38604823 ~ 38605227 (-) |
| G254556 | NA | non-coding | downstream | 147609 | 38603671 ~ 38603983 (-) |
| G254554 | NA | non-coding | downstream | 150177 | 38601150 ~ 38601415 (-) |
| G254553 | NA | non-coding | downstream | 151216 | 38600082 ~ 38600376 (-) |
| G254730 | NA | non-coding | upstream | 2982 | 38754938 ~ 38755884 (-) |
| G254734 | NA | non-coding | upstream | 10007 | 38761963 ~ 38762193 (-) |
| G254738 | NA | non-coding | upstream | 13581 | 38765537 ~ 38765811 (-) |
| G254739 | NA | non-coding | upstream | 14307 | 38766263 ~ 38766518 (-) |
| G254740 | NA | non-coding | upstream | 15252 | 38767208 ~ 38767536 (-) |
| gpatch3 | gpatch3 | other | downstream | 2018152 | 36731832 ~ 36754332 (-) |
| G251681 | NA | other | downstream | 2393621 | 36357325 ~ 36357971 (-) |
| G251462 | LOC106584332 | other | downstream | 2607020 | 36140112 ~ 36144572 (-) |
| G249990 | NA | other | downstream | 3855296 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 3861638 | 34889506 ~ 34889954 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 647305 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 892615 | 39644571 ~ 39645743 (-) |
| G256016 | LOC106581772 | other | upstream | 1066692 | 39818648 ~ 39818980 (-) |
| G256616 | NA | other | upstream | 1570550 | 40322506 ~ 40322898 (-) |
| G256632 | NA | other | upstream | 1583254 | 40335210 ~ 40335440 (-) |
