G254735


Basic Information

Item Value
gene id G254735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38764337 ~ 38764657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290224
GTGATTGTCTGAGAAGGGATAGTCGCCTCTTCCTCCTTGTCTTGATAGTCAGGATTTAAACCACTTTAGACGGTGGGCTGCAGCTCCCTGTCTTTCCTGGTCTAAAGAAAGGTGAGTTTATTTCTTCACCTCATGTTGAGGTTCAAAGTTCCAACCATTTTAGACATGTAGCTACCGCTCCGTGCTTTTCTGGTCTAATGTTAATTTTGTTACCAAGGCTTTTTATGCACTCTGGCCAAAGGGGACGACTCCATCCGTCTGACATGCTCTCTGACGTCACTTGGGGCATGGCTACTTCCTTATGTAcagtttattttccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290224 True 321 lncRNA 0.45 1 38764337 38764657

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 3847 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 514315 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1008885 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1072439 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1274767 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 407240 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 628984 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 843512 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 894096 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 941784 39706441 ~ 39709665 (+)
G254570 NA non-coding upstream 256 38760708 ~ 38764081 (+)
G254589 NA non-coding upstream 140188 38623941 ~ 38624149 (+)
G254583 NA non-coding upstream 145073 38619033 ~ 38619264 (+)
G254562 NA non-coding upstream 151494 38612627 ~ 38612843 (+)
G254447 NA non-coding upstream 161721 38602358 ~ 38602616 (+)
G254736 NA non-coding downstream 204 38764861 ~ 38765123 (+)
G254741 NA non-coding downstream 3600 38768257 ~ 38768462 (+)
G254743 NA non-coding downstream 4208 38768865 ~ 38769176 (+)
G254751 NA non-coding downstream 8877 38773534 ~ 38774940 (+)
G254758 NA non-coding downstream 15465 38780122 ~ 38780346 (+)
G254445 NA other upstream 163471 38600487 ~ 38600866 (+)
G254204 NA other upstream 322603 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 671603 38092322 ~ 38092734 (+)
G253299 NA other upstream 1036999 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 2136795 36623610 ~ 36627542 (+)
G254816 NA other downstream 78853 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1675412 40440040 ~ 40452542 (+)
G261749 NA other downstream 5487412 44252069 ~ 44252551 (+)
G262037 NA other downstream 5755762 44520419 ~ 44525408 (+)

Expression


Co-expression Network