Gene
RNA
| Item | Value |
|---|---|
| gene id | G254740 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 38767208 ~ 38767536 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU290229 | True | 329 | lncRNA | 0.49 | 1 | 38767208 | 38767536 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519945 | LOC105007140 | coding | downstream | 365920 | 38263798 ~ 38401288 (-) |
| LOC110519943 | LOC106586049 | coding | downstream | 704452 | 37814709 ~ 38062756 (-) |
| LOC118944514 | NA | coding | downstream | 1075203 | 37688775 ~ 37692204 (-) |
| clybl | clybl | coding | downstream | 1125756 | 37443635 ~ 37641452 (-) |
| LOC110519937 | zic2 | coding | downstream | 1351947 | 37410268 ~ 37416025 (-) |
| LOC110519947 | LOC106586044 | coding | upstream | 9402 | 38776852 ~ 38778156 (-) |
| LOC110519948 | mycbp2 | coding | upstream | 28157 | 38795693 ~ 39140087 (-) |
| LOC110519952 | snx25 | coding | upstream | 464346 | 39231882 ~ 39252150 (-) |
| LOC110519953 | LOC106586054 | coding | upstream | 491255 | 39258791 ~ 39269466 (-) |
| LOC118954848 | NA | coding | upstream | 514973 | 39282509 ~ 39288215 (-) |
| G254739 | NA | non-coding | downstream | 690 | 38766263 ~ 38766518 (-) |
| G254738 | NA | non-coding | downstream | 1397 | 38765537 ~ 38765811 (-) |
| G254734 | NA | non-coding | downstream | 5015 | 38761963 ~ 38762193 (-) |
| G254730 | NA | non-coding | downstream | 11324 | 38754938 ~ 38755884 (-) |
| G254729 | NA | non-coding | downstream | 15252 | 38751592 ~ 38751956 (-) |
| G254742 | NA | non-coding | upstream | 550 | 38768086 ~ 38768473 (-) |
| G254745 | NA | non-coding | upstream | 1764 | 38769300 ~ 38769593 (-) |
| G254747 | NA | non-coding | upstream | 3812 | 38771348 ~ 38771733 (-) |
| G254748 | NA | non-coding | upstream | 4278 | 38771814 ~ 38772092 (-) |
| G254749 | NA | non-coding | upstream | 4674 | 38772210 ~ 38773198 (-) |
| gpatch3 | gpatch3 | other | downstream | 2033768 | 36731832 ~ 36754332 (-) |
| G251681 | NA | other | downstream | 2409237 | 36357325 ~ 36357971 (-) |
| G251462 | LOC106584332 | other | downstream | 2622636 | 36140112 ~ 36144572 (-) |
| G249990 | NA | other | downstream | 3870912 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 3877254 | 34889506 ~ 34889954 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 631725 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 877035 | 39644571 ~ 39645743 (-) |
| G256016 | LOC106581772 | other | upstream | 1051112 | 39818648 ~ 39818980 (-) |
| G256616 | NA | other | upstream | 1554970 | 40322506 ~ 40322898 (-) |
| G256632 | NA | other | upstream | 1567674 | 40335210 ~ 40335440 (-) |
