G254751


Basic Information

Item Value
gene id G254751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38773534 ~ 38774940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290240
ATAAGGTGCAGAGCGTTTGATTTGAATGCAATCAAATCAAACGCTCTGCACCTTATTGTGACGTTTTACTAATAACAACCTATTAGGTGTAGTTGTCACCCCCAGCTCCGCTAAAACCATTGGCAACTGTGTGCCGTTTTCAAGGGATCGTTAAATAAATGTCAACTATTTGATTGTAATAACGTTACTTCTTGAAGAGCGTagtcagaactacacatttcAAATTATTCCATGCAAAACAATTACACACATGTATCTcgatcatcagagttatacagcaagtaactgcatgcttttcatgatcagtaaaTAATCAGAACTGTGTAGTTCTGACTAACTTCTTCAAGAGCTGGGGGTTTCCTGTCCATTTTTATTGTGCTTATAACAAAATGCCTGAAGGAATTTATGGAAACTATTACAAATATGGCATTGAAAAATACAATGTTCAGACTGGTATGTTCACAATATTGGGTTATAGAGAAAAAATATTCTACGTGCTGAGGTATAAGTGGTTTAAGTGGCCTTTAATTTCCCTGCACTCTACGTGTGGAATTATCTACAATAGACTTTAAAATTGGCGGAATTGGTGCCTACAAGGAATTTCAGATGGTTGTTTTTATTGAACCTTAGTTagttaggcaagtcagttaagaacaaattattatttacgctgggccaattgagagccgccctatgtgactcccaatcacggccggttcagcctggattcgaatcaggatgtctgtagtgacgcctcaagcactgagataaagtgccttagaccgctgcgccactcggggacctttttactgaagaatgtctgtttttttatgaTTTACGGGTATTTTattgtgtatatgaatgtgtagtTTAATGTGCTCATTGTATTTTGGGGCTCATCtggaaaagagaccttggtctcagcattgactctctGTCAAAATAAAGAATCAATAAAAATAAACCATTTCTTTGGGGACTGTGGTCTAAATACCCAGCATCACTTTCTACTCCACCCATTCCAATAGACCAACAGCATAGCAGCGCCCTTCGAACAGTTAcgtgccttgatcaagggcacaaTGGCAGTAGGTGTCACCTGGGATGTAATATCATATGCAGTGctttcaaaaagtattcatacccttgacttattccatattctgttgtgttacagcctgaattcaaaatggattaaagatttttttctcacccatctaccttCAATACTCCATAATGCaaagtttttagacatttttgaaaatgtattgaaaatgaaataaagagATATAAGATGTTTTCACAAccatgagtcaatactttgtagaagcacatttTGCATCGATTACAGCTGTGGGTCTTTCTGGGCAAGTCTCTAAGAGCTCTCCACACCTGCATTGTTCAACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290240 True 1407 lncRNA 0.38 1 38773534 38774940

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 13044 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 523512 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1018082 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1081636 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1283964 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 396957 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 618701 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 833229 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 883813 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 931501 39706441 ~ 39709665 (+)
G254743 NA non-coding upstream 4358 38768865 ~ 38769176 (+)
G254741 NA non-coding upstream 5072 38768257 ~ 38768462 (+)
G254736 NA non-coding upstream 8411 38764861 ~ 38765123 (+)
G254735 NA non-coding upstream 8877 38764337 ~ 38764657 (+)
G254570 NA non-coding upstream 9453 38760708 ~ 38764081 (+)
G254758 NA non-coding downstream 5182 38780122 ~ 38780346 (+)
G254769 NA non-coding downstream 18854 38793794 ~ 38793997 (+)
G254770 NA non-coding downstream 19849 38794789 ~ 38795057 (+)
G254814 NA non-coding downstream 86803 38861743 ~ 38862237 (+)
G254848 NA non-coding downstream 128806 38903746 ~ 38904270 (+)
G254445 NA other upstream 172668 38600487 ~ 38600866 (+)
G254204 NA other upstream 331800 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 680800 38092322 ~ 38092734 (+)
G253299 NA other upstream 1046196 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 2145992 36623610 ~ 36627542 (+)
G254816 NA other downstream 68570 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1665129 40440040 ~ 40452542 (+)
G261749 NA other downstream 5477129 44252069 ~ 44252551 (+)
G262037 NA other downstream 5745479 44520419 ~ 44525408 (+)

Expression


Co-expression Network