G254769


Basic Information

Item Value
gene id G254769
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38793794 ~ 38793997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290262
ctgttaGCATACCCATCCGCTTCCTTACCTTATGTTTACACTTGGCTGGATAGCTAATGGTAGCTGTTTGCAGTGAAAAATATAATCACTGAAAACTTCAACCCCATAATGAAAAACGTATTCGCCCGAGCCAAATAACACTTATCGGGAACCAACTCGGTGCCATCAGTTTAAGATTGAGCAAGATTTAGTTTTCTTGAAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290262 True 204 lncRNA 0.40 1 38793794 38793997

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 33304 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 543772 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1038342 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1101896 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1304224 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 377900 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 599644 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 814172 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 864756 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 912444 39706441 ~ 39709665 (+)
G254758 NA non-coding upstream 13448 38780122 ~ 38780346 (+)
G254751 NA non-coding upstream 18854 38773534 ~ 38774940 (+)
G254743 NA non-coding upstream 24618 38768865 ~ 38769176 (+)
G254741 NA non-coding upstream 25332 38768257 ~ 38768462 (+)
G254736 NA non-coding upstream 28671 38764861 ~ 38765123 (+)
G254770 NA non-coding downstream 792 38794789 ~ 38795057 (+)
G254814 NA non-coding downstream 67746 38861743 ~ 38862237 (+)
G254848 NA non-coding downstream 109749 38903746 ~ 38904270 (+)
G254926 NA non-coding downstream 184979 38978976 ~ 39057441 (+)
G255067 NA non-coding downstream 368483 39162480 ~ 39162879 (+)
G254445 NA other upstream 192928 38600487 ~ 38600866 (+)
G254204 NA other upstream 352060 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 701060 38092322 ~ 38092734 (+)
G253299 NA other upstream 1066456 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 2166252 36623610 ~ 36627542 (+)
G254816 NA other downstream 49513 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1646072 40440040 ~ 40452542 (+)
G261749 NA other downstream 5458072 44252069 ~ 44252551 (+)
G262037 NA other downstream 5726422 44520419 ~ 44525408 (+)

Expression


Co-expression Network