G254816


Basic Information

Item Value
gene id G254816
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38843510 ~ 38844556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290310
catacatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgaaacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaattatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatacaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccgaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcacgctggatgaactgcagagatctacagctgaggagggagactctgtccataggacaacaatcagtcgatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290310 True 988 TUCP 0.42 2 38843510 38844556

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 83020 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 593488 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1088058 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1151612 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1353940 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 327341 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 549085 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 763613 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 814197 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 861885 39706441 ~ 39709665 (+)
G254770 NA non-coding upstream 48453 38794789 ~ 38795057 (+)
G254769 NA non-coding upstream 49513 38793794 ~ 38793997 (+)
G254758 NA non-coding upstream 63164 38780122 ~ 38780346 (+)
G254751 NA non-coding upstream 68570 38773534 ~ 38774940 (+)
G254743 NA non-coding upstream 74334 38768865 ~ 38769176 (+)
G254814 NA non-coding downstream 17187 38861743 ~ 38862237 (+)
G254848 NA non-coding downstream 59190 38903746 ~ 38904270 (+)
G254926 NA non-coding downstream 134420 38978976 ~ 39057441 (+)
G255067 NA non-coding downstream 317924 39162480 ~ 39162879 (+)
G254445 NA other upstream 242644 38600487 ~ 38600866 (+)
G254204 NA other upstream 401776 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 750776 38092322 ~ 38092734 (+)
G253299 NA other upstream 1116172 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 2215968 36623610 ~ 36627542 (+)
LOC110519969 LOC106586020 other downstream 1595513 40440040 ~ 40452542 (+)
G261749 NA other downstream 5407513 44252069 ~ 44252551 (+)
G262037 NA other downstream 5675863 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6994365 45838921 ~ 45839480 (+)

Expression


Co-expression Network