G254814


Basic Information

Item Value
gene id G254814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38861743 ~ 38862237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290308
TAAAAAGTTAGTGTGAAATAGTGGgtgaaaaaggttgggaacccctGGTATACAGCATGACCCCTGACCTTATCCTCTCCCTCTGGTGATGACAGCAGGTTCTTCTCCTCCTGTTCAGGGGTGGGCTCAGCATCTCCGCAGATCAGCTTCCCAAacacCTGTGAGGTAATGAGGCGGAACACGCGGAGTGTCTCGGCCTCACAGTTCTTCTGTTGGGCCACGCTGGCCGAGATCTGACCCGCAATCTTGATGCTCTCGCCCTCCTTCCATCCCAACACCTTGACCTGGCGCACCCGCAGCGTGTTCTCGGGCCCCTTCAGCTCCACTTTGATCACATGGTGGTCTCCCCCAGGAACCTCGCTGGTCACCCAGCCCATGTGACGCGAGTCGAGGT

Function

NR:

description
hypothetical protein cypCar_00011584, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU290308 True 394 lncRNA 0.57 2 38861743 38862237

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 101253 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 611721 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1106291 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1169845 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1372173 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 309660 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 531404 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 745932 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 796516 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 844204 39706441 ~ 39709665 (+)
G254770 NA non-coding upstream 66686 38794789 ~ 38795057 (+)
G254769 NA non-coding upstream 67746 38793794 ~ 38793997 (+)
G254758 NA non-coding upstream 81397 38780122 ~ 38780346 (+)
G254751 NA non-coding upstream 86803 38773534 ~ 38774940 (+)
G254743 NA non-coding upstream 92567 38768865 ~ 38769176 (+)
G254848 NA non-coding downstream 41509 38903746 ~ 38904270 (+)
G254926 NA non-coding downstream 116739 38978976 ~ 39057441 (+)
G255067 NA non-coding downstream 300243 39162480 ~ 39162879 (+)
G254874 NA non-coding downstream 313528 39175765 ~ 39176166 (+)
G254816 NA other upstream 17187 38843510 ~ 38844556 (+)
G254445 NA other upstream 260877 38600487 ~ 38600866 (+)
G254204 NA other upstream 420009 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 769009 38092322 ~ 38092734 (+)
G253299 NA other upstream 1134405 37726948 ~ 37727338 (+)
LOC110519969 LOC106586020 other downstream 1577832 40440040 ~ 40452542 (+)
G261749 NA other downstream 5389832 44252069 ~ 44252551 (+)
G262037 NA other downstream 5658182 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6976684 45838921 ~ 45839480 (+)

Expression


Co-expression Network