G254848


Basic Information

Item Value
gene id G254848
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38903746 ~ 38904270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290348
TGGGGCTCGGCCTTGGGTTTGACCATCTGTGTGCCAGGTGGGATCATGCCTTTAGGAGGGTCTTTCACCTCCACCTCCAGACCAGCATCGATCTCAATGCCGTCAATGGTGACGTGGATTGTGTAGAGGCCCACAGCCCCGGGGGTCCAGTTGGCACTGTACGTCCCGTCTGTGTTAGCCCGGATCAACATGTTCTCACTGGG

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MYCBP2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290348 True 203 lncRNA 0.58 2 38903746 38904270

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 143256 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 653724 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1148294 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1211848 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1414176 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 267627 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 489371 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 703899 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 754483 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 802171 39706441 ~ 39709665 (+)
G254814 NA non-coding upstream 41509 38861743 ~ 38862237 (+)
G254770 NA non-coding upstream 108689 38794789 ~ 38795057 (+)
G254769 NA non-coding upstream 109749 38793794 ~ 38793997 (+)
G254758 NA non-coding upstream 123400 38780122 ~ 38780346 (+)
G254751 NA non-coding upstream 128806 38773534 ~ 38774940 (+)
G254926 NA non-coding downstream 74706 38978976 ~ 39057441 (+)
G255067 NA non-coding downstream 258210 39162480 ~ 39162879 (+)
G254874 NA non-coding downstream 271495 39175765 ~ 39176166 (+)
G255075 NA non-coding downstream 273283 39177553 ~ 39177760 (+)
G254816 NA other upstream 59190 38843510 ~ 38844556 (+)
G254445 NA other upstream 302880 38600487 ~ 38600866 (+)
G254204 NA other upstream 462012 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 811012 38092322 ~ 38092734 (+)
G253299 NA other upstream 1176408 37726948 ~ 37727338 (+)
LOC110519969 LOC106586020 other downstream 1535799 40440040 ~ 40452542 (+)
G261749 NA other downstream 5347799 44252069 ~ 44252551 (+)
G262037 NA other downstream 5616149 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6934651 45838921 ~ 45839480 (+)

Expression


Co-expression Network