Gene
RNA
| Item | Value |
|---|---|
| gene id | G255642 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 39172112 ~ 39172762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SLAIN motif-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU291280 | True | 651 | lncRNA | 0.44 | 1 | 39172112 | 39172762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519948 | mycbp2 | coding | downstream | 32025 | 38795693 ~ 39140087 (-) |
| LOC110519947 | LOC106586044 | coding | downstream | 393956 | 38776852 ~ 38778156 (-) |
| LOC110519945 | LOC105007140 | coding | downstream | 770824 | 38263798 ~ 38401288 (-) |
| LOC110519943 | LOC106586049 | coding | downstream | 1109356 | 37814709 ~ 38062756 (-) |
| LOC118944514 | NA | coding | downstream | 1480107 | 37688775 ~ 37692204 (-) |
| LOC110519952 | snx25 | coding | upstream | 59120 | 39231882 ~ 39252150 (-) |
| LOC110519953 | LOC106586054 | coding | upstream | 86029 | 39258791 ~ 39269466 (-) |
| LOC118954848 | NA | coding | upstream | 109747 | 39282509 ~ 39288215 (-) |
| LOC118944667 | NA | coding | upstream | 173003 | 39345765 ~ 39364915 (-) |
| LOC110519954 | LOC106586056 | coding | upstream | 216013 | 39388775 ~ 39393540 (-) |
| G255635 | NA | non-coding | downstream | 7229 | 39164459 ~ 39164883 (-) |
| G255504 | NA | non-coding | downstream | 385352 | 38786440 ~ 38786760 (-) |
| G255503 | NA | non-coding | downstream | 387699 | 38784203 ~ 38784413 (-) |
| G255497 | NA | non-coding | downstream | 393078 | 38778768 ~ 38779034 (-) |
| G255643 | NA | non-coding | upstream | 123 | 39172885 ~ 39173603 (-) |
| G255644 | NA | non-coding | upstream | 5464 | 39178226 ~ 39178621 (-) |
| G255645 | NA | non-coding | upstream | 7330 | 39180092 ~ 39180324 (-) |
| G255646 | NA | non-coding | upstream | 8404 | 39181166 ~ 39181413 (-) |
| G255651 | NA | non-coding | upstream | 15605 | 39188367 ~ 39188887 (-) |
| gpatch3 | gpatch3 | other | downstream | 2438672 | 36731832 ~ 36754332 (-) |
| G251681 | NA | other | downstream | 2814141 | 36357325 ~ 36357971 (-) |
| G251462 | LOC106584332 | other | downstream | 3027540 | 36140112 ~ 36144572 (-) |
| G249990 | NA | other | downstream | 4275816 | 34895958 ~ 34896296 (-) |
| G249978 | NA | other | downstream | 4282158 | 34889506 ~ 34889954 (-) |
| LOC110519955 | LOC106586057 | other | upstream | 226499 | 39399261 ~ 39508811 (-) |
| G255911 | NA | other | upstream | 471809 | 39644571 ~ 39645743 (-) |
| G256016 | LOC106581772 | other | upstream | 645886 | 39818648 ~ 39818980 (-) |
| G256616 | NA | other | upstream | 1149744 | 40322506 ~ 40322898 (-) |
| G256632 | NA | other | upstream | 1162448 | 40335210 ~ 40335440 (-) |
