G255082


Basic Information

Item Value
gene id G255082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39188324 ~ 39189618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290609
acaaagcctccttcactcacgccgccaaacttaccctagtaaaactgactatcctaccgatcctcgactttggcgatgtcatctacaaaattgcttccaacactctactcagcaaactggatgcagtttatcacagtgccatccgttttgtcactaaagcaccttataccacccaccactgcgacttgtatgctctagtcggctggccctcgctacatattcgtcgccagacccactggctccaggtcatctacaagtccatgctaggtaaagctccgccttatctcagttcactggttacgatggcaacacccatccgtagcacgcgctccagcaggtgtatctcactgatcatccctaaagccaacacctcatttggccgcctttcgttccagttctctgttgcctgtgactggaacgaattgcaaaatcgctgaagttggagacttttatctccctcaccaacttcaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtctattggtaaatagcccacccactttcacctacctcatccccatactgtttttatttatttatttttatttttctgctcttttgcacaccaatatctctacctgtacataaccatctgatcatttatcactccagtgttaatctgcataattgtaattatttgcctaccttctcatgccttttgcacacaatgtatatatagactccccttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgccttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaataaaaaaaaaaataaaaaaagtttaatccaccagaaaataaataatacaacaaaCATTAAGGTAAACTATCTGGTCATtaaggtatatctcactggtcacccccaaagccaatacctcctttggtcgtctttccttccagttctctgctgccaatgactggaacgaactgcaaaaatctctgaagctggagactcatatctccctcactagctttaagcacctgCTGTCTGAGCAggtcacagatcactgcacctgtacataacccatctgtaaacagcccatctatctacctacctaatccccatacattatttatttatttatcttgctccttcgcaccccagtatctctacttgcaaattcatcttctgcacatctaccattccagtgtttcaattgctatattgtaattactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290609 True 1295 lncRNA 0.42 1 39188324 39189618

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 427834 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 938302 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1432872 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1496426 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1698754 37428004 ~ 37489579 (+)
trnaf-gaa NA coding downstream 204023 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 418551 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 469135 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 516823 39706441 ~ 39709665 (+)
LOC110519964 LOC106586025 coding downstream 524072 39713690 ~ 39741849 (+)
G255076 NA non-coding upstream 9307 39178196 ~ 39179017 (+)
G255075 NA non-coding upstream 10564 39177553 ~ 39177760 (+)
G254874 NA non-coding upstream 12158 39175765 ~ 39176166 (+)
LOC110519950 LOC106586053 non-coding upstream 15881 39171897 ~ 39214104 (+)
G255067 NA non-coding upstream 25445 39162480 ~ 39162879 (+)
G255083 NA non-coding downstream 859 39190477 ~ 39190825 (+)
G255084 NA non-coding downstream 3184 39192802 ~ 39193030 (+)
G254870 NA non-coding downstream 66034 39255652 ~ 39256757 (+)
G255115 NA non-coding downstream 80000 39269618 ~ 39269965 (+)
G255195 NA non-coding downstream 218661 39408279 ~ 39410302 (+)
G254816 NA other upstream 343768 38843510 ~ 38844556 (+)
G254445 NA other upstream 587458 38600487 ~ 38600866 (+)
G254204 NA other upstream 746590 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1095590 38092322 ~ 38092734 (+)
G253299 NA other upstream 1460986 37726948 ~ 37727338 (+)
LOC110519969 LOC106586020 other downstream 1250451 40440040 ~ 40452542 (+)
G261749 NA other downstream 5062451 44252069 ~ 44252551 (+)
G262037 NA other downstream 5330801 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6649303 45838921 ~ 45839480 (+)

Expression


Co-expression Network