G255751


Basic Information

Item Value
gene id G255751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39408086 ~ 39410397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU291424
AgttggagtcggaagtttacatacacataggttggagtcattaaaactagttttcaaccactccacaaattccttgttaatgaactatagttttggcaagtcggttaggacatctactttgtgcatgacacaagtaatttttccaacaattgtttactgacagattatttcacttataattcactgtatcacaattccagtgagtcagaagtttacctacactaagttgactgggcctttaaacaacttggaaaattccagatgaTGTCATGGCTTAGGAGCTTCTGAgggactaattgacataatttgagtcaattggaggtgtacatgtgcatgtatttcaaggcctagcttcaaactcagtgtgctctttgcttgacatcatgggaaaatcaaaagaaatcagctaagacctcagaagaaaaagtGGAGAcctcctccacaagtctggttcatccttgggagaaatttcccaACGCCTGAATGCACCAAGTTcagctgtacaaacaatagtacgcaagtataaacaccatgggaccacgcagccgtgataccactcaggaaggagacgcgttctgtctcctagagatgaacatactttggtgcgaaaagtgcaaatcaatcccagaacaacagcaaagtaccttgtgaagatgctggaggtaacGGGTACagaagtatttatatccacagtaaaacgagtcctatatcaacataacctgaaaggccgctcaacaaggaagaagccactgctagactacggtttgcaactgcacttggggacaaagatcacattttttggagaaatgtcctctggtctgatgaaacaaaaatagaactgtttggccataatcaccatcgttatgtttggaggaaaagggggaggcttgcaagccgaagaacaccatcccaaccgtgaagctcgGGGGTgacagcgtcatgttgtgggggtgttttacaggagggactggtgcacttcacaaaaatatatggcatcacgaggaaggaTAATTACGCggatatattgaatcaacatctcaagacatcagtcaggaagttaaagcttggtcgcaaatgggtcttccaaatggacaatgaccccaagcatacttccaaagttgtggaaaaatggcccaaggacaacaaagtccaggcattggagtggccatcacaaagccctgacctcaatcctatagaacatttgtgggcagaactgaaaagcgtgtgtgagcaaggaggcatacaaacctgactcagttacaccagctctgtcaggaggattgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacccgaaacgtttgacccaagttaaacaatttaaagacaatgctaccaaatactaattgagtgtatgtaaacttctgacccgctgggaatgtgatgaaagaaattaaagctgaaataaatcattctcgctactattattctggcatttcacattcttaaaataaagtggtgatcctaactgacctaagaccgggAATATTTACTAGGGTTAAATGGCAGGAATTGGAGAAAAATTAGtaactgtatttggctaaggtgtatgtaaacttcagactttaactgtgtatgtatgtatgtatgtatatatatgtatgtagacagacagacagacacatagacagacagacatttggacacactcattccagggtttttctttatttgtgctattttctatattgtataataatagtgaagacatccaaattatgtaacaacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaattatatttgagattcgttAAAGTTGCCACCCTTCgtcttgatgaaagctttgcacacacttggcattatctcaaccagctctATGAGGTAGACACctgcaatgcatttcaattaacaggtgtgccatgttaatttgtggaatttctttccttaatgcgtttgagccaatcagttgtgttgtgacaaggtagggctggtatacagaagagaggcttggtaactaatgaacttatcctctgcagcagaggtaacttggtcttcctttcctgtggcggccctcatgagagccagttacatcTTAGCGCTTGAATTAAAAGTTATTgcaattttccggattgactgaccttgatgtcttatagtaatgatggatttgtcatttctctttgcttatttgagctgttcttgccataatatgtacttcgtcttttaccaaatagggctatcttctgtgtatatatatgtatatatgtgtgtgtgtgtgtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291424 True 2290 lncRNA 0.40 2 39408086 39410397

Neighbor

gene id symbol gene type direction distance location
LOC110519954 LOC106586056 coding downstream 14546 39388775 ~ 39393540 (-)
LOC118944667 NA coding downstream 43171 39345765 ~ 39364915 (-)
LOC118954848 NA coding downstream 119871 39282509 ~ 39288215 (-)
LOC110519953 LOC106586054 coding downstream 138620 39258791 ~ 39269466 (-)
LOC110519952 snx25 coding downstream 155936 39231882 ~ 39252150 (-)
LOC110519955 LOC106586057 coding upstream 835 39399261 ~ 39508811 (-)
LOC110519957 LOC106586009 coding upstream 221102 39631499 ~ 39643295 (-)
LOC110519961 NA coding upstream 235658 39646055 ~ 39660579 (-)
LOC110519967 shox coding upstream 700809 40111206 ~ 40125263 (-)
LOC118944520 NA coding upstream 869217 40279614 ~ 40282876 (-)
G255686 NA non-coding downstream 132529 39275335 ~ 39275557 (-)
G255683 NA non-coding downstream 134837 39272997 ~ 39273249 (-)
G255679 NA non-coding downstream 155320 39252552 ~ 39252766 (-)
G255808 NA non-coding upstream 57180 39467577 ~ 39515975 (-)
G255897 NA non-coding upstream 207246 39617643 ~ 39621075 (-)
G255916 NA non-coding upstream 246630 39657027 ~ 39657546 (-)
G255920 NA non-coding upstream 261621 39672018 ~ 39672218 (-)
gpatch3 gpatch3 other downstream 2674646 36731832 ~ 36754332 (-)
G251681 NA other downstream 3050115 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 3263514 36140112 ~ 36144572 (-)
G249990 NA other downstream 4511790 34895958 ~ 34896296 (-)
G249978 NA other downstream 4518132 34889506 ~ 34889954 (-)
G255911 NA other upstream 234174 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 408251 39818648 ~ 39818980 (-)
G256616 NA other upstream 912109 40322506 ~ 40322898 (-)
G256632 NA other upstream 924813 40335210 ~ 40335440 (-)
G259259 sdpr other upstream 2353420 41763817 ~ 41767588 (-)

Expression


Co-expression Network