G255195


Basic Information

Item Value
gene id G255195
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39408279 ~ 39410302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290758
ctggctctcatgagggccgccacaggaaaggaagaccaagttacctctgctgcagaggataagttcattagttaccaagcctctcttctgtataccagccctaccttgtcacaacacaactgattggctcaaacgcattaaggaaagaaattccacaaattaacatggcacacctgttaattgaaatgcattgcagGTGTCTACCTCATagagctggttgagataatgccaagtgtgtgcaaagctttcatcaagacGAAGGGTGGCAACTTTaacgaatctcaaatataatttgtttaacacttttttggttactacatgattccatatgtgttgttacataatttggatgtcttcactattattatacaatatagaaaatagcacaaataaagaaaaaccctggaatgagtgtgtccaaatgtctgtctgtctatgtgtctgtctgtctgtctacatacatatatatacatacatacatacatacacagttaaagtctgaagtttacatacaccttagccaaatacagttaCTAATTTTTCTCCAATTCCTGCCATTTAACCCTAGTAAATATTcccggtcttaggtcagttaggatcaccactttattttaagaatgtgaaatgccagaataatagtagcgagaatgatttatttcagctttaatttctttcatcacattcccagcgggtcagaagtttacatacactcaattagtatttggtagcattgtctttaaattgtttaacttgggtcaaacgtttcgggtagccttccacaagcttcccacaataagttgggtgaattttggcccaatcctcctgacagagctggtgtaactgagtcaggtttgtatgcctccttgctcacacacgcttttcagttctgcccacaaatgttctataggattgaggtcagggctttgtgatggccactccaatgcctggactttgttgtccttgggccatttttccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagctttaacttcctgactgatgtcttgagatgttgattcaatatatccGCGTAATTAtccttcctcgtgatgccatatatttttgtgaagtgcaccagtccctcctgtaaaacacccccacaacatgacgctgtcACCCCcgagcttcacggttgggatggtgttcttcggcttgcaagcctcccccttttcctccaaacataacgatggtgattatggccaaacagttctatttttgtttcatcagaccagaggacatttctccaaaaaatgtgatctttgtccccaagtgcagttgcaaaccgtagtctagcagtggcttcttccttgttgagcggcctttcaggttatgttgatataggactcgttttactgtggatataaatacttctGTACCCgttacctccagcatcttcacaaggtactttgctgttgttctgggattgatttgcacttttcgcaccaaagtatgttcatctctaggagacagaacgcgtctccttcctgagtggtatcacggctgcgtggtcccatggtgtttatacttgcgtactattgtttgtacagctgAACTTGGTGCATTCAGGCGTtgggaaatttctcccaaggatgaaccagacttgtggaggaggTCTCCactttttcttctgaggtcttagctgatttcttttgattttcccatgatgtcaagcaaagagcacactgagtttgaagctaggccttgaaatacatgcacatgtacacctccaattgactcaaattatgtcaattagtcccTCAGAAGCTCCTAAGCCATGACAtcatctggaattttccaagttgtttaaaggcccagtcaacttagtgtaggtaaacttctgactcactggaattgtgatacagtgaattataagtgaaataatctgtcagtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290758 True 2002 lncRNA 0.41 2 39408279 39410302

Neighbor

gene id symbol gene type direction distance location
trnaf-gaa NA coding upstream 14566 39393641 ~ 39393713 (+)
LOC110519950 LOC106586053 coding upstream 194175 39171897 ~ 39214104 (+)
LOC110519946 NA coding upstream 647789 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 1158257 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1652827 37748695 ~ 37756709 (+)
LOC110519956 LOC105026395 coding downstream 197867 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 248451 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 296139 39706441 ~ 39709665 (+)
LOC110519964 LOC106586025 coding downstream 303388 39713690 ~ 39741849 (+)
LOC110519965 LOC106586023 coding downstream 335472 39745774 ~ 39769426 (+)
G255115 NA non-coding upstream 138314 39269618 ~ 39269965 (+)
G254870 NA non-coding upstream 151522 39255652 ~ 39256757 (+)
G255084 NA non-coding upstream 215249 39192802 ~ 39193030 (+)
G255083 NA non-coding upstream 217454 39190477 ~ 39190825 (+)
G255082 NA non-coding upstream 218661 39188324 ~ 39189618 (+)
G255262 NA non-coding downstream 93229 39503531 ~ 39524024 (+)
G255344 NA non-coding downstream 236389 39646691 ~ 39646895 (+)
G255346 NA non-coding downstream 237517 39647819 ~ 39648901 (+)
G255348 NA non-coding downstream 242886 39653188 ~ 39653459 (+)
G255349 NA non-coding downstream 243954 39654256 ~ 39654503 (+)
G254816 NA other upstream 563723 38843510 ~ 38844556 (+)
G254445 NA other upstream 807413 38600487 ~ 38600866 (+)
G254204 NA other upstream 966545 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 1315545 38092322 ~ 38092734 (+)
G253299 NA other upstream 1680941 37726948 ~ 37727338 (+)
LOC110519969 LOC106586020 other downstream 1029767 40440040 ~ 40452542 (+)
G261749 NA other downstream 4841767 44252069 ~ 44252551 (+)
G262037 NA other downstream 5110117 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 6428619 45838921 ~ 45839480 (+)

Expression


Co-expression Network