G255916


Basic Information

Item Value
gene id G255916
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 39657027 ~ 39657546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU291600
ctgtaaaatgatatagcatcagcttgatcccctctgttgaagaagcttggaccttcttttttgttattttcagtggtattgttaacaaacacgcccccgtGAGAATGAggattaaaaacaggttcagaccctggttcgactgtgatcttgcagagttactccacctcaggaattgcatttggcgaaaggcttggCACATGCATACTTAGACTGACTGGCTATCGTTCAGGCAAattagaaataagtgcactcaggctatccggaaggccaaagttagttactttaaggagcagttctctctctgtgggtctaaccccaagaagttctggaaaacggttaaggacctggagaataaaccctcctcctcacagctgcccatgtcccttaatgttgatgatgtggttgttacagacaagaagcacatggctgaggtctttaatcaccacttcattaagtcaggattcctatttgactatgccatgcctccttgcccatccaacatttcctcatctcccacccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291600 True 520 lncRNA 0.45 1 39657027 39657546

Neighbor

gene id symbol gene type direction distance location
LOC110519957 LOC106586009 coding downstream 13732 39631499 ~ 39643295 (-)
LOC110519955 LOC106586057 coding downstream 148216 39399261 ~ 39508811 (-)
LOC110519954 LOC106586056 coding downstream 263487 39388775 ~ 39393540 (-)
LOC118944667 NA coding downstream 292112 39345765 ~ 39364915 (-)
LOC118954848 NA coding downstream 368812 39282509 ~ 39288215 (-)
LOC110519967 shox coding upstream 453660 40111206 ~ 40125263 (-)
LOC118944520 NA coding upstream 622068 40279614 ~ 40282876 (-)
LOC110519968 LOC106586018 coding upstream 738832 40396378 ~ 40405035 (-)
LOC110519979 LOC106586061 coding upstream 2586030 42243576 ~ 42291605 (-)
col6a3 LOC106598405 coding upstream 2634182 42291728 ~ 42329627 (-)
LOC110519961 NA non-coding downstream 10429 39646055 ~ 39660579 (-)
G255897 NA non-coding downstream 35952 39617643 ~ 39621075 (-)
G255808 NA non-coding downstream 141052 39467577 ~ 39515975 (-)
G255751 NA non-coding downstream 246630 39408086 ~ 39410397 (-)
G255920 NA non-coding upstream 14472 39672018 ~ 39672218 (-)
G255966 NA non-coding upstream 88298 39745844 ~ 39750074 (-)
G256018 NA non-coding upstream 162414 39819960 ~ 39820197 (-)
G256024 NA non-coding upstream 173564 39831110 ~ 39831325 (-)
G256028 NA non-coding upstream 182893 39840439 ~ 39840918 (-)
G255911 NA other downstream 11284 39644571 ~ 39645743 (-)
gpatch3 gpatch3 other downstream 2923587 36731832 ~ 36754332 (-)
G251681 NA other downstream 3299056 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 3512455 36140112 ~ 36144572 (-)
G256016 LOC106581772 other upstream 161102 39818648 ~ 39818980 (-)
G256616 NA other upstream 664960 40322506 ~ 40322898 (-)
G256632 NA other upstream 677664 40335210 ~ 40335440 (-)
G259259 sdpr other upstream 2106271 41763817 ~ 41767588 (-)
G259576 LOC106599288 other upstream 2628084 42285630 ~ 42327995 (-)

Expression


Co-expression Network