G257482


Basic Information

Item Value
gene id G257482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40979731 ~ 40980095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU293244
gaaaaaaatataaCTAAattgaattcaaataattgaactgaTGTCGATCAATTTGTTTTAacctctgatctccccatcccggatccgggatcgtgaatatagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaattaatctatttgctctcaagcttagccttttgttaacagcactgtcatctcagattttcaaaatatgcttttgaaccatagctaaacaagtatttgtgtaagagtattgatagcctagcattgcattaagcctagcatttagcatgcaacattttccacaaaaacaataaaagcattcaaataaaataatttacctttgaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293244 True 365 lncRNA 0.32 1 40979731 40980095

Neighbor

gene id symbol gene type direction distance location
LOC118944668 NA coding upstream 118551 40858297 ~ 40861180 (+)
dnah7 dnah7 coding upstream 277053 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 527189 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1197327 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1210305 39745774 ~ 39769426 (+)
LOC110519971 tmeff2 coding downstream 574376 41554471 ~ 41725755 (+)
LOC110519972 sdpr coding downstream 759995 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 806858 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 962004 41922501 ~ 41965278 (+)
LOC110519975 LOC106586062 coding downstream 1007160 41987255 ~ 42160686 (+)
G257435 NA non-coding upstream 33603 40945754 ~ 40946128 (+)
G257303 LOC106594194 non-coding upstream 135892 40843610 ~ 40843839 (+)
G257299 NA non-coding upstream 137298 40842211 ~ 40842433 (+)
G257298 NA non-coding upstream 138456 40841041 ~ 40841275 (+)
G257271 NA non-coding upstream 156414 40822911 ~ 40823317 (+)
G257624 NA non-coding downstream 194908 41175003 ~ 41252652 (+)
G257901 NA non-coding downstream 290333 41270428 ~ 41270633 (+)
G258000 NA non-coding downstream 398923 41379018 ~ 41379405 (+)
G258303 NA non-coding downstream 651844 41631939 ~ 41703505 (+)
G258228 NA non-coding downstream 745687 41725782 ~ 41726046 (+)
LOC110519960 LOC106586058 other upstream 1311643 39658753 ~ 39668297 (+)
G254816 NA other upstream 2135175 38843510 ~ 38844556 (+)
G254445 NA other upstream 2378865 38600487 ~ 38600866 (+)
G254204 NA other upstream 2537997 38441166 ~ 38441734 (+)
G261749 NA other downstream 3271974 44252069 ~ 44252551 (+)
G262037 NA other downstream 3540324 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 4858826 45838921 ~ 45839480 (+)
G263710 NA other downstream 4954024 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 5095389 46075484 ~ 46079425 (+)

Expression


Co-expression Network