G258303


Basic Information

Item Value
gene id G258303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 41631939 ~ 41703505 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU294087
ggaaaacaataatttgtgtaaaagtagctagctagagttagcatttcgcgttagcatttagcgttagcattagcgttagcatccagcacgcaacattaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcatttagatagcagatgctcagtttttccaaaaagattccttgtgtattagaaatagctccgttttatacatcacatttggctaccaaaaaaaatccataaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatctctcttcattgatacatcgttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294087 True 401 lncRNA 0.33 2 41631939 41703505

Neighbor

gene id symbol gene type direction distance location
LOC118944668 NA coding upstream 770759 40858297 ~ 40861180 (+)
dnah7 dnah7 coding upstream 929261 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 1179397 40440040 ~ 40452542 (+)
asmtl asmtl coding upstream 1849535 39769763 ~ 39782404 (+)
LOC110519965 LOC106586023 coding upstream 1862513 39745774 ~ 39769426 (+)
LOC110519972 sdpr coding downstream 36585 41740090 ~ 41767612 (+)
spegb LOC106586064 coding downstream 83448 41786953 ~ 41915322 (+)
LOC110519974 LOC106586063 coding downstream 238594 41922501 ~ 41965278 (+)
LOC110519975 LOC106586062 coding downstream 283750 41987255 ~ 42160686 (+)
LOC110519977 csn8 coding downstream 472376 42175881 ~ 42205548 (+)
G258000 NA non-coding upstream 252534 41379018 ~ 41379405 (+)
G257901 NA non-coding upstream 361306 41270428 ~ 41270633 (+)
G257624 NA non-coding upstream 379287 41175003 ~ 41252652 (+)
G257482 NA non-coding upstream 651844 40979731 ~ 40980095 (+)
G257435 NA non-coding upstream 685811 40945754 ~ 40946128 (+)
G258228 NA non-coding downstream 22277 41725782 ~ 41726046 (+)
G258395 NA non-coding downstream 75194 41778699 ~ 41778904 (+)
G258396 NA non-coding downstream 76670 41780175 ~ 41780484 (+)
G258443 NA non-coding downstream 141941 41845446 ~ 41845660 (+)
G258444 NA non-coding downstream 143577 41847082 ~ 41847372 (+)
LOC110519960 LOC106586058 other upstream 1963851 39658753 ~ 39668297 (+)
G254816 NA other upstream 2787383 38843510 ~ 38844556 (+)
G254445 NA other upstream 3031073 38600487 ~ 38600866 (+)
G254204 NA other upstream 3190205 38441166 ~ 38441734 (+)
G261749 NA other downstream 2548564 44252069 ~ 44252551 (+)
G262037 NA other downstream 2816914 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 4135416 45838921 ~ 45839480 (+)
G263710 NA other downstream 4230614 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 4371979 46075484 ~ 46079425 (+)

Expression


Co-expression Network