G259259 (sdpr)


Basic Information

Item Value
gene id G259259
gene name sdpr
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 41763817 ~ 41767588 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU295117
ctACATTTTGTGtggggggaagcctggcttcccttggcatccatgaatacacaccattGATTGGAGATGGGCTGCGCTTttagaagagagtgagagaaagatgaGTGTGAGacaaatggggagagagagaatgtgcgtgtgcgtttgtgtgagagagcatcagggagagaaagaggagatgtCTCTGTGATGGATAGATAGAAAGAGTATATAGCTTGTGGTTAAAAAATGTAAGGCCATGCCGGTGCGCAAACAATTTATACCTCCTCTCAAAACACGGGTCCTTATTCTCCAATCATGGATTTCATATAATTGAATTGGTGTTGGCATTAGCTGGAGGGAGTTTTCACAATTTTTAAATTCATGACACTGAGTGTGGAGAATCGGGATGCAACCTGTCCCATTTTCTGTTCTACTCCCACAGTTCCAAAAACAATGTTTTTCTAAATGATCTACCCTTCTCATcctcatccctcccttcctcccctccttcctagTGAGCCAGTGCCCAGGGGCCTCCCTGGGGGCAACACACCTGTGGCCCATGAGGGCCCCAGTTCCCCCTGCCGCCACGTCCAGGCAGAGAGGGTAGTGCATGAAAAATGGGCTGCCAAAGAGTCATATGTCAAACCCAGGAATgcctctctgctctgcctctccttctctctttccctttctccaaGATCTCTCTCAACTGAGAAATAACATACAATACATAATCTGCTTAATGGTTTCATTCTGTTTTTAATTACATTTCATTAGACACCTATATATTTTGGAGGCCCCTAAGTGTGTACTAGGCACTGACTGGTTGCAAGGCACTTGTAATCAGAAAGGAATAGGCCAGGGGATGCTAACCATGAAGTTCAGGCTGATACTGCATATACTCCCCACAGAGGGGTTTAAATTCCATTCCATCTTATGGATATGAAACCATATAAACAGTAGCCACAAGTTAGTGGCAAGTGCTGCACATAGATTAGATGAACTATCCTCCCTTAGTGATACGAGCAAGTAGATTCCAAAAGGAGAGAATTTAAAGGAATGGAATCTTTCACTATCACTCTTATCTTCTAAAACATGCAGGAATTCCTCGCTCCGGGACAGCAATTACTCACACCAGCTTGTGTAGGCCTAAGTTTCAAGGCTTCCGTGCGTGCAGGAGCATGTGAGTGAATGTCTGTGTGGGTGCCTCTGTAAATGTGTGCTAGTTTATTAAGGACAATTCCACCAATCATCATACccgctgtatttctgtattttgaaagttacatatcttaacttgattgctgacatgcaaagcattttgggaatatatcaacaatggactaatgaaacaaataccaaaatagatTTTGGGTGGAGTCTTCCTTTAAtgttttgtgtgtgcatgtgtgtgtttcaacCATATAACAATGTGTAAATGCTTGTTTATGCTTGTTTATGCTATTCAAACCTTGTTTATGTGAGTGATCAACTCCAAAAGTCCACATTGTTAGACTATAATATTATGGAAGTACAATACTCAGGAGACAGTACCCGATAAAGTTTGACAGTATTCAACAAACATGATTCTATATAAATCATTATACCCACTGATAATCCCATAATCGAATATGTACATACACATAAGATTAGAATTGCCCTGATATAGGGTGGTTTAGGAAAGTCCCAGTATGTAGAGCCTTAAGGTAGACGCCAGTAGACGTTAACACAAGACAGCTATTTCAACTTACTCTCCTCAAATATTGAAGGTGTGGTCTGTACCTAGTGAACCATTAACCACTTTCAAGCAGTTTTTCTGTTCTGGTGAGTATTTATTAAGGCAAATAAACTAAGGTAGGGATGGCACAAAACTGCCTCAATTATATGGCTCTTTTTTTACCCTGCACTCAGGTTGTGTGGTTACATCAAGACATGGGTCAAATACATGTAtcacaaacattcaaatacctgAGGTGTGCTTGATTCAGCTTCATCCACATGCCTGAGGTGCAGAGTTTGCACTTTTTGGGACTATTCCAATGGTTTTATTATAAGCAAAATGAAGCACACCGCATTTGCCACATGTATTTGACTCATCCGAACACTCTAAACGACTTTCCTTCTCTCGTCGTACTTCCTCCCTATCCCCCTTCTTACATTGAACCCGCTCTCTGAAATAATAAAAATATCCTTGATGAAGATAAGAAGCTATTTTCAGGCAGAGCATTTGGACATATTACAGCCCTATATCCCTTCAGCCTTACACCACCCTTGCTGTAGAAACCTAGCTACCAACCATACCAATGCCCAGACTGCCTGGCAACAAGCTACCATCCCCAAACTGTGGGGCTTTACCTTTTTTGCCAGAGATTTACCGGCATTCACACGAGGCAGAGGAACAAAGAGACtatctgtcagacagacagagaggcccatgcagagacagacaaatagagagagatagttgGCTCAGTGTACTGGAGATGTGCTGTTCTCTTGAAACAGAAGCAAGGTTCCAGTTGGGAAGGTGAGTAATAGTCTCTTGGCACACTGGTTCTTTTCTTAAGGTAGCCCCACAGAAGGGTAGCtagttaaacacaccaggcaggagcAAATGATGCAGGATCACTTGATGGGATGGCCTGTATCGCTGGCACAGGAGCTTGAGTTTTTTCAGGAATAGTTCTGCTAAGGACACGTCTTTCATGTTGtgtatatacattgtgtgtgtgtgtccatgtgtgtgcatgcgtgcgtgtgtgtgcatgtgtgtctgtctagGAGATATCTCGGAAACATGGTTAGGAAAGACGGAGGGATGACTATACTGTTGGCATGGTAATATAAAGAGGGCAGGGAATGTGCAGGAGCAAAGGTTGAGGTGGATGCGATTAAGAGGCTTGCTCCACAGTGATTCCAGTAGCAGAAGGTATGGGAGCTTTCACCTCCACCGggctctcctgctcctcctcttcatcatcctcctcttcctcctctccaataTCATCATCATGCTCCGGGACAGCGAGCCCCGCCGGACGATCAGTGGTCAGGTGACACTCCAGGCCCCCTGCTTCTCCATTGAAGGTCAGCTTGGCCTCTACGCTCCCAGTGCTAGAGGGACTAGccagctcctctcctccctccacacccAGCACTTCCTGGGAATGCACCTCGGCCAGGGGCAGATCCCCATCCATGCTTCCCAGGGGAGGGATATCCACGTGGGCATGCCCGCTAGGCGAGCCTCCGGGCTGGGTTGAGTCCTCCCCTTCACCACGCATCTTCTTCACATTGAACGTCATTGGCGACACCTTGAATGAGGAACTCTTGGAGGCAGGGCTCTTTGGGTGGTTTGGTGTGAAGCTCTTCTTGATCTTCTCGCGGCTCGCTGTCGGCACAATCTTGGTGCTGATCTTGCTCATCTTTTTCTCGATGCTCTGGCGTGAGAAAGCCTTCTTCAGGCTGTCCACCTTCTTCAGACTGGAGCGCTTCAGCCGGTCTGCTCTGGATCTCTCAACGGAGGGCCGGGTTGCTCCCAGACCCAGCGTTGCCTCTTCCTCCAGGGCTTCGTCTTCCTCCTGGTGACCCCCAGCATCATCGTCGGAGGAGGACAAGCTGATGGTATGGAGACCCTCCTCCTGGGAGCGGTTGGCGTCTGTGCCGGCGACGGACGGGGCAGGCGCCGCAAGAGCGTTGTCCTCCAGCTGGCTGGCCTGGGGGGTCTTGGGGGAGTCCTTGATGAACACGCTGGAGGGGATCTCATT

Function

NR:

description
serum deprivation-response protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU295117 True 3752 TUCP 0.47 2 41763817 41767588

Neighbor

gene id symbol gene type direction distance location
LOC110519968 LOC106586018 coding downstream 1358782 40396378 ~ 40405035 (-)
LOC118944520 NA coding downstream 1480941 40279614 ~ 40282876 (-)
LOC110519967 shox coding downstream 1638554 40111206 ~ 40125263 (-)
LOC110519961 NA coding downstream 2103238 39646055 ~ 39660579 (-)
LOC110519957 LOC106586009 coding downstream 2120522 39631499 ~ 39643295 (-)
LOC110519979 LOC106586061 coding upstream 475988 42243576 ~ 42291605 (-)
col6a3 LOC106598405 coding upstream 524140 42291728 ~ 42329627 (-)
LOC110519978 LOC106586070 coding upstream 562051 42329639 ~ 42334795 (-)
LOC118936375 LOC106581667 coding upstream 567319 42334907 ~ 42339654 (-)
LOC110519982 LOC106586070 coding upstream 572322 42339910 ~ 42364268 (-)
G259255 NA non-coding downstream 29656 41733754 ~ 41734161 (-)
G259247 NA non-coding downstream 36583 41726998 ~ 41727234 (-)
G259054 NA non-coding downstream 212441 41509257 ~ 41551376 (-)
G259059 NA non-coding downstream 223120 41466985 ~ 41540697 (-)
G258136 NA non-coding downstream 325072 41438429 ~ 41438745 (-)
G259281 NA non-coding upstream 1665 41769253 ~ 41769738 (-)
G259307 NA non-coding upstream 32998 41800586 ~ 41801082 (-)
G259328 NA non-coding upstream 73417 41841005 ~ 41841272 (-)
G259344 NA non-coding upstream 137703 41905291 ~ 41918305 (-)
G259496 NA non-coding upstream 322256 42089844 ~ 42123312 (-)
G256632 NA other downstream 1428377 40335210 ~ 40335440 (-)
G256616 NA other downstream 1440919 40322506 ~ 40322898 (-)
G256016 LOC106581772 other downstream 1944837 39818648 ~ 39818980 (-)
G255911 NA other downstream 2118074 39644571 ~ 39645743 (-)
LOC110519955 LOC106586057 other downstream 2255115 39399261 ~ 39508811 (-)
G259576 LOC106599288 other upstream 518042 42285630 ~ 42327995 (-)
G259579 LOC106586070 other upstream 522671 42290259 ~ 42319385 (-)
G261580 NA other upstream 2221936 43989524 ~ 44031505 (-)
G262993 NA other upstream 3242584 45010172 ~ 45012249 (-)

Expression


Co-expression Network