G258443


Basic Information

Item Value
gene id G258443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 41845446 ~ 41845660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU294231
gcttccgtccctctcctcgcccctacctgggctcgaaccaggaacacatcgacaacagccacactcgaagcagcgttacccatcgctccacaaaagccacggagcaaggggaataactactccaaggctcagagcgagtgacgtttgaaacgctattagcgcacacccagctaactagctagccatttcacatagGTTACACTAGCCATTAGGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294231 True 215 lncRNA 0.54 1 41845446 41845660

Neighbor

gene id symbol gene type direction distance location
LOC110519972 sdpr coding upstream 77834 41740090 ~ 41767612 (+)
LOC110519971 tmeff2 coding upstream 119691 41554471 ~ 41725755 (+)
LOC118944668 NA coding upstream 984266 40858297 ~ 40861180 (+)
dnah7 dnah7 coding upstream 1142768 40461161 ~ 40702678 (+)
LOC110519969 LOC106586020 coding upstream 1392904 40440040 ~ 40452542 (+)
LOC110519974 LOC106586063 coding downstream 96439 41922501 ~ 41965278 (+)
LOC110519975 LOC106586062 coding downstream 141595 41987255 ~ 42160686 (+)
LOC110519977 csn8 coding downstream 330221 42175881 ~ 42205548 (+)
LOC110519976 LOC100194537 coding downstream 350806 42196466 ~ 42198481 (+)
LOC110519988 LOC106586103 coding downstream 615877 42461537 ~ 42534154 (+)
G258396 NA non-coding upstream 64962 41780175 ~ 41780484 (+)
G258395 NA non-coding upstream 66542 41778699 ~ 41778904 (+)
G258228 NA non-coding upstream 119400 41725782 ~ 41726046 (+)
G258303 NA non-coding upstream 141941 41631939 ~ 41703505 (+)
G258000 NA non-coding upstream 466041 41379018 ~ 41379405 (+)
G258444 NA non-coding downstream 1422 41847082 ~ 41847372 (+)
G258445 NA non-coding downstream 3071 41848731 ~ 41848991 (+)
G258446 LOC106608106 non-coding downstream 3691 41849351 ~ 41849763 (+)
G258447 NA non-coding downstream 4344 41850004 ~ 41850231 (+)
LOC110519960 LOC106586058 other upstream 2177358 39658753 ~ 39668297 (+)
G254816 NA other upstream 3000890 38843510 ~ 38844556 (+)
G254445 NA other upstream 3244580 38600487 ~ 38600866 (+)
G254204 NA other upstream 3403712 38441166 ~ 38441734 (+)
G261749 NA other downstream 2406409 44252069 ~ 44252551 (+)
G262037 NA other downstream 2674759 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 3993261 45838921 ~ 45839480 (+)
G263710 NA other downstream 4088459 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 4229824 46075484 ~ 46079425 (+)

Expression


Co-expression Network