G258657


Basic Information

Item Value
gene id G258657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 42233105 ~ 42233311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU294463
ctagcttctggctagcttctggctagcttctggttagcttctggctagcttctattgtggatttcagatttgaggtaaatgatactgttttttttttttaattggtgaggcaggttgcaggagagtgttttgaagttgagtttttggaaaagaaaatatataaaagatatgcgaagaaaggtgtaaatatatatatatatgcgggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU294463 True 207 lncRNA 0.36 1 42233105 42233311

Neighbor

gene id symbol gene type direction distance location
LOC110519977 csn8 coding upstream 27557 42175881 ~ 42205548 (+)
LOC110519976 LOC100194537 coding upstream 34624 42196466 ~ 42198481 (+)
LOC110519975 LOC106586062 coding upstream 72419 41987255 ~ 42160686 (+)
LOC110519974 LOC106586063 coding upstream 267864 41922501 ~ 41965278 (+)
spegb LOC106586064 coding upstream 317783 41786953 ~ 41915322 (+)
LOC110519988 LOC106586103 coding downstream 228226 42461537 ~ 42534154 (+)
LOC110519991 cssa25h2orf47 coding downstream 310310 42543621 ~ 42550621 (+)
pgap1 pgap1 coding downstream 328829 42562140 ~ 42590366 (+)
LOC110519981 hecw2 coding downstream 383258 42616569 ~ 42682056 (+)
LOC110519990 stk17b coding downstream 463235 42696546 ~ 42715828 (+)
G258650 NA non-coding upstream 5137 42227666 ~ 42227968 (+)
G258539 NA non-coding upstream 162893 42019252 ~ 42070212 (+)
G258538 NA non-coding upstream 216082 42016740 ~ 42017023 (+)
G258447 NA non-coding upstream 382874 41850004 ~ 41850231 (+)
G258664 NA non-coding downstream 8552 42241863 ~ 42242082 (+)
G258682 NA non-coding downstream 91160 42324471 ~ 42327172 (+)
G258784 NA non-coding downstream 210553 42443864 ~ 42444118 (+)
G258824 NA non-coding downstream 260144 42493455 ~ 42566108 (+)
G258877 NA non-coding downstream 379076 42612387 ~ 42614145 (+)
LOC110519969 LOC106586020 other upstream 1780925 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 2565017 39658753 ~ 39668297 (+)
G254816 NA other upstream 3388549 38843510 ~ 38844556 (+)
G254445 NA other upstream 3632239 38600487 ~ 38600866 (+)
G254204 NA other upstream 3791371 38441166 ~ 38441734 (+)
G261749 NA other downstream 2018758 44252069 ~ 44252551 (+)
G262037 NA other downstream 2287108 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 3605610 45838921 ~ 45839480 (+)
G263710 NA other downstream 3700808 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 3842173 46075484 ~ 46079425 (+)

Expression


Co-expression Network