Gene
RNA
| Item | Value |
|---|---|
| gene id | G258664 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 42241863 ~ 42242082 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU294470 | True | 220 | lncRNA | 0.41 | 1 | 42241863 | 42242082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519977 | csn8 | coding | upstream | 36315 | 42175881 ~ 42205548 (+) |
| LOC110519976 | LOC100194537 | coding | upstream | 43382 | 42196466 ~ 42198481 (+) |
| LOC110519975 | LOC106586062 | coding | upstream | 81177 | 41987255 ~ 42160686 (+) |
| LOC110519974 | LOC106586063 | coding | upstream | 276622 | 41922501 ~ 41965278 (+) |
| spegb | LOC106586064 | coding | upstream | 326541 | 41786953 ~ 41915322 (+) |
| LOC110519988 | LOC106586103 | coding | downstream | 219455 | 42461537 ~ 42534154 (+) |
| LOC110519991 | cssa25h2orf47 | coding | downstream | 301539 | 42543621 ~ 42550621 (+) |
| pgap1 | pgap1 | coding | downstream | 320058 | 42562140 ~ 42590366 (+) |
| LOC110519981 | hecw2 | coding | downstream | 374487 | 42616569 ~ 42682056 (+) |
| LOC110519990 | stk17b | coding | downstream | 454464 | 42696546 ~ 42715828 (+) |
| G258657 | NA | non-coding | upstream | 8552 | 42233105 ~ 42233311 (+) |
| G258650 | NA | non-coding | upstream | 13895 | 42227666 ~ 42227968 (+) |
| G258539 | NA | non-coding | upstream | 171651 | 42019252 ~ 42070212 (+) |
| G258538 | NA | non-coding | upstream | 224840 | 42016740 ~ 42017023 (+) |
| G258682 | NA | non-coding | downstream | 82389 | 42324471 ~ 42327172 (+) |
| G258784 | NA | non-coding | downstream | 201782 | 42443864 ~ 42444118 (+) |
| G258824 | NA | non-coding | downstream | 251373 | 42493455 ~ 42566108 (+) |
| G258877 | NA | non-coding | downstream | 370305 | 42612387 ~ 42614145 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 1789683 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 2573775 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 3397307 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 3640997 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 3800129 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 2009987 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 2278337 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 3596839 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 3692037 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 3833402 | 46075484 ~ 46079425 (+) |
