G261206


Basic Information

Item Value
gene id G261206
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43826149 ~ 43826445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297178
gcaaattgacaggtcaagggcaggcaaaggtcagtaatccagatcagagtccataagatacagaacagcaggcagtctcGGGGTCATGGctggcagaggtcaataatccatgatggtgtgacaaggtacagaacagcaggcaggctcaggggcctgttcggccctcctgttcctatagtccacgatcagctccttttgtcttgctcacattgagggagaggttgtcatcCTGGCaaaacactgccaggtctctgacctcctccctataggctgtctcatcgatgtcggtgatcaggc

Function

NR:

description
collagen Type XI Alpha2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297178 True 297 lncRNA 0.53 1 43826149 43826445

Neighbor

gene id symbol gene type direction distance location
LOC110519984 LOC106586113 coding upstream 312262 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 742389 43051602 ~ 43083760 (+)
LOC110519992 LOC106586087 coding upstream 881552 42895618 ~ 42944597 (+)
LOC110519980 nckap5 coding upstream 942827 42746657 ~ 42883322 (+)
LOC110519990 stk17b coding upstream 1110321 42696546 ~ 42715828 (+)
LOC110519994 LOC100380648 coding downstream 4516 43830961 ~ 43845629 (+)
LOC110519995 LOC106586118 coding downstream 30644 43857089 ~ 43875820 (+)
LOC110519997 lct coding downstream 49819 43876264 ~ 43895648 (+)
LOC118956122 NA coding downstream 116679 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 249377 44075822 ~ 44208107 (+)
G261124 NA non-coding upstream 1510 43821073 ~ 43824639 (+)
G261156 NA non-coding upstream 15747 43810129 ~ 43810402 (+)
G261150 NA non-coding upstream 20614 43805313 ~ 43805535 (+)
G261123 NA non-coding upstream 21947 43765209 ~ 43804202 (+)
G260544 NA non-coding upstream 303395 43519040 ~ 43522754 (+)
G261207 NA non-coding downstream 763 43827208 ~ 43827656 (+)
G261212 NA non-coding downstream 2418 43828863 ~ 43829155 (+)
G261213 NA non-coding downstream 2738 43829183 ~ 43829407 (+)
G261215 NA non-coding downstream 3725 43830170 ~ 43830493 (+)
G261217 NA non-coding downstream 14495 43840940 ~ 43843576 (+)
LOC110519969 LOC106586020 other upstream 3373969 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4158061 39658753 ~ 39668297 (+)
G254816 NA other upstream 4981593 38843510 ~ 38844556 (+)
G254445 NA other upstream 5225283 38600487 ~ 38600866 (+)
G254204 NA other upstream 5384415 38441166 ~ 38441734 (+)
G261749 NA other downstream 425624 44252069 ~ 44252551 (+)
G262037 NA other downstream 693974 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 2012476 45838921 ~ 45839480 (+)
G263710 NA other downstream 2107674 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2249039 46075484 ~ 46079425 (+)

Expression


Co-expression Network