G261213


Basic Information

Item Value
gene id G261213
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43829183 ~ 43829407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297185
gtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttcttctttaagaggctcctctgtcctccactcgttacctgtattaatggcacctgtttgaacttgttgtcagtataaaagacacctgtccacaacctcaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297185 True 225 lncRNA 0.44 1 43829183 43829407

Neighbor

gene id symbol gene type direction distance location
LOC110519984 LOC106586113 coding upstream 315296 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 745423 43051602 ~ 43083760 (+)
LOC110519992 LOC106586087 coding upstream 884586 42895618 ~ 42944597 (+)
LOC110519980 nckap5 coding upstream 945861 42746657 ~ 42883322 (+)
LOC110519990 stk17b coding upstream 1113355 42696546 ~ 42715828 (+)
LOC110519994 LOC100380648 coding downstream 1554 43830961 ~ 43845629 (+)
LOC110519995 LOC106586118 coding downstream 27682 43857089 ~ 43875820 (+)
LOC110519997 lct coding downstream 46857 43876264 ~ 43895648 (+)
LOC118956122 NA coding downstream 113717 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 246415 44075822 ~ 44208107 (+)
G261212 NA non-coding upstream 28 43828863 ~ 43829155 (+)
G261207 NA non-coding upstream 1527 43827208 ~ 43827656 (+)
G261206 NA non-coding upstream 2738 43826149 ~ 43826445 (+)
G261124 NA non-coding upstream 4544 43821073 ~ 43824639 (+)
G261156 NA non-coding upstream 18781 43810129 ~ 43810402 (+)
G261215 NA non-coding downstream 763 43830170 ~ 43830493 (+)
G261217 NA non-coding downstream 11533 43840940 ~ 43843576 (+)
G261268 NA non-coding downstream 66433 43895840 ~ 43897118 (+)
G261269 NA non-coding downstream 67940 43897347 ~ 43897554 (+)
G261272 NA non-coding downstream 70260 43899667 ~ 43899875 (+)
LOC110519969 LOC106586020 other upstream 3377003 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4161095 39658753 ~ 39668297 (+)
G254816 NA other upstream 4984627 38843510 ~ 38844556 (+)
G254445 NA other upstream 5228317 38600487 ~ 38600866 (+)
G254204 NA other upstream 5387449 38441166 ~ 38441734 (+)
G261749 NA other downstream 422662 44252069 ~ 44252551 (+)
G262037 NA other downstream 691012 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 2009514 45838921 ~ 45839480 (+)
G263710 NA other downstream 2104712 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2246077 46075484 ~ 46079425 (+)

Expression


Co-expression Network