G261215


Basic Information

Item Value
gene id G261215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43830170 ~ 43830493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297187
GTACATGTtggaattacactgaacaaaaatagaaacgcaacatgcaaaagtgttggttccatgttgcatgagctgaaataaaagattccagaaatgttccatacacacaaaagcgTATTTCTTTCCAATtttgtgcagaaatgtgtttacatccctgtttgtgagcatttctccattgtcaagataatccatccacctgacaggtttggcatatctataaactgattaaacagcattagaAATGGATTAAaaagcataatcattacacaggtgttccttttgctGTGGGcattaaaaggccactctaaaatgtgcagttttgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297187 True 324 lncRNA 0.36 1 43830170 43830493

Neighbor

gene id symbol gene type direction distance location
LOC110519984 LOC106586113 coding upstream 316283 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 746410 43051602 ~ 43083760 (+)
LOC110519992 LOC106586087 coding upstream 885573 42895618 ~ 42944597 (+)
LOC110519980 nckap5 coding upstream 946848 42746657 ~ 42883322 (+)
LOC110519990 stk17b coding upstream 1114342 42696546 ~ 42715828 (+)
LOC110519994 LOC100380648 coding downstream 468 43830961 ~ 43845629 (+)
LOC110519995 LOC106586118 coding downstream 26596 43857089 ~ 43875820 (+)
LOC110519997 lct coding downstream 45771 43876264 ~ 43895648 (+)
LOC118956122 NA coding downstream 112631 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 245329 44075822 ~ 44208107 (+)
G261213 NA non-coding upstream 763 43829183 ~ 43829407 (+)
G261212 NA non-coding upstream 1015 43828863 ~ 43829155 (+)
G261207 NA non-coding upstream 2514 43827208 ~ 43827656 (+)
G261206 NA non-coding upstream 3725 43826149 ~ 43826445 (+)
G261124 NA non-coding upstream 5531 43821073 ~ 43824639 (+)
G261217 NA non-coding downstream 10447 43840940 ~ 43843576 (+)
G261268 NA non-coding downstream 65347 43895840 ~ 43897118 (+)
G261269 NA non-coding downstream 66854 43897347 ~ 43897554 (+)
G261272 NA non-coding downstream 69174 43899667 ~ 43899875 (+)
G261274 NA non-coding downstream 70415 43900908 ~ 43901187 (+)
LOC110519969 LOC106586020 other upstream 3377990 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4162082 39658753 ~ 39668297 (+)
G254816 NA other upstream 4985614 38843510 ~ 38844556 (+)
G254445 NA other upstream 5229304 38600487 ~ 38600866 (+)
G254204 NA other upstream 5388436 38441166 ~ 38441734 (+)
G261749 NA other downstream 421576 44252069 ~ 44252551 (+)
G262037 NA other downstream 689926 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 2008428 45838921 ~ 45839480 (+)
G263710 NA other downstream 2103626 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2244991 46075484 ~ 46079425 (+)

Expression


Co-expression Network