Gene
RNA
| Item | Value |
|---|---|
| gene id | G261222 |
| gene name | LOC100380648 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 43831008 ~ 43835153 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ATP-dependent RNA helicase DDX18-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU297194 | True | 511 | lncRNA | 0.48 | 4 | 43831008 | 43835153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118956029 | NA | coding | downstream | 89206 | 43706881 ~ 43741802 (-) |
| LOC110519993 | LOC106586116 | coding | downstream | 204838 | 43521331 ~ 43626170 (-) |
| LOC110519985 | LOC106586111 | coding | downstream | 779594 | 43015700 ~ 43051414 (-) |
| LOC110519987 | LOC106586109 | coding | downstream | 826951 | 42946744 ~ 43004057 (-) |
| LOC118955837 | NA | coding | downstream | 1213832 | 42592366 ~ 42617176 (-) |
| LOC110519998 | LOC106586121 | coding | upstream | 396846 | 44231999 ~ 44235888 (-) |
| LOC118956139 | NA | coding | upstream | 424016 | 44259169 ~ 44262998 (-) |
| LOC110519999 | LOC106586089 | coding | upstream | 455673 | 44290826 ~ 44294051 (-) |
| LOC110520000 | NA | coding | upstream | 590215 | 44425368 ~ 44468711 (-) |
| LOC110520004 | LOC106586125 | coding | upstream | 688557 | 44523710 ~ 44718478 (-) |
| G261211 | NA | non-coding | downstream | 2583 | 43828158 ~ 43828425 (-) |
| G261186 | NA | non-coding | downstream | 41058 | 43787318 ~ 43789950 (-) |
| G260914 | NA | non-coding | downstream | 320986 | 43424354 ~ 43510022 (-) |
| G260792 | NA | non-coding | downstream | 580440 | 43250342 ~ 43250568 (-) |
| G260776 | NA | non-coding | downstream | 598731 | 43232033 ~ 43232277 (-) |
| G261237 | NA | non-coding | upstream | 16463 | 43851616 ~ 43851818 (-) |
| G261315 | NA | non-coding | upstream | 61552 | 43896705 ~ 43896958 (-) |
| G261320 | NA | non-coding | upstream | 66222 | 43901375 ~ 43901631 (-) |
| G261326 | NA | non-coding | upstream | 77566 | 43912719 ~ 43912927 (-) |
| G261335 | NA | non-coding | upstream | 83995 | 43919148 ~ 43919462 (-) |
| G259576 | LOC106599288 | other | downstream | 1503013 | 42285630 ~ 42327995 (-) |
| G259579 | LOC106586070 | other | downstream | 1511623 | 42290259 ~ 42319385 (-) |
| col6a3 | LOC106598405 | other | downstream | 1515650 | 42291728 ~ 42329627 (-) |
| G259259 | sdpr | other | downstream | 2063420 | 41763817 ~ 41767588 (-) |
| G256632 | NA | other | downstream | 3495568 | 40335210 ~ 40335440 (-) |
| G261580 | NA | other | upstream | 154371 | 43989524 ~ 44031505 (-) |
| G262993 | NA | other | upstream | 1175019 | 45010172 ~ 45012249 (-) |
| LOC110520012 | cssa21h2orf88 | other | upstream | 1264187 | 45099333 ~ 45104286 (-) |
| G263274 | NA | other | upstream | 1701179 | 45536332 ~ 45537542 (-) |
| G265988 | NA | other | upstream | 3764065 | 47599218 ~ 47599815 (-) |
