Gene
RNA
| Item | Value |
|---|---|
| gene id | G261217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 43840940 ~ 43843576 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU297189 | True | 242 | lncRNA | 0.46 | 2 | 43840940 | 43843576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519984 | LOC106586113 | coding | upstream | 327053 | 43169785 ~ 43513887 (+) |
| LOC110519989 | LOC106581699 | coding | upstream | 757180 | 43051602 ~ 43083760 (+) |
| LOC110519992 | LOC106586087 | coding | upstream | 896343 | 42895618 ~ 42944597 (+) |
| LOC110519980 | nckap5 | coding | upstream | 957618 | 42746657 ~ 42883322 (+) |
| LOC110519990 | stk17b | coding | upstream | 1125112 | 42696546 ~ 42715828 (+) |
| LOC110519995 | LOC106586118 | coding | downstream | 13513 | 43857089 ~ 43875820 (+) |
| LOC110519997 | lct | coding | downstream | 32688 | 43876264 ~ 43895648 (+) |
| LOC118956122 | NA | coding | downstream | 99548 | 43943124 ~ 43986958 (+) |
| LOC110504116 | LOC106586120 | coding | downstream | 232246 | 44075822 ~ 44208107 (+) |
| LOC110520002 | LOC106586124 | coding | downstream | 626595 | 44470171 ~ 44475272 (+) |
| G261215 | NA | non-coding | upstream | 10447 | 43830170 ~ 43830493 (+) |
| G261213 | NA | non-coding | upstream | 11533 | 43829183 ~ 43829407 (+) |
| G261212 | NA | non-coding | upstream | 11785 | 43828863 ~ 43829155 (+) |
| G261207 | NA | non-coding | upstream | 13284 | 43827208 ~ 43827656 (+) |
| G261206 | NA | non-coding | upstream | 14495 | 43826149 ~ 43826445 (+) |
| G261268 | NA | non-coding | downstream | 52264 | 43895840 ~ 43897118 (+) |
| G261269 | NA | non-coding | downstream | 53771 | 43897347 ~ 43897554 (+) |
| G261272 | NA | non-coding | downstream | 56091 | 43899667 ~ 43899875 (+) |
| G261274 | NA | non-coding | downstream | 57332 | 43900908 ~ 43901187 (+) |
| G261277 | LOC105893191 | non-coding | downstream | 60926 | 43904502 ~ 43904875 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 3388760 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 4172852 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 4996384 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 5240074 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 5399206 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 408493 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 676843 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 1995345 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 2090543 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 2231908 | 46075484 ~ 46079425 (+) |
