G261272


Basic Information

Item Value
gene id G261272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43899667 ~ 43899875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU297245
gcatagtgttggtcccatgtttcatgagcagcAATAAGAGATCCCAGAAATGCTCCATACCCACAAAAAAAacaatttgtgcacaaatgtgtttatatccctgttagtgagcatttatcctttgccaagataattcatccatctgacaggtgtggcgtatcaagacgctgattaaacagcatgatcattacacaggtgcacctgtgtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297245 True 209 lncRNA 0.41 1 43899667 43899875

Neighbor

gene id symbol gene type direction distance location
LOC110519997 lct coding upstream 4019 43876264 ~ 43895648 (+)
LOC110519995 LOC106586118 coding upstream 23847 43857089 ~ 43875820 (+)
LOC110519994 LOC100380648 coding upstream 54038 43830961 ~ 43845629 (+)
LOC110519984 LOC106586113 coding upstream 385780 43169785 ~ 43513887 (+)
LOC110519989 LOC106581699 coding upstream 815907 43051602 ~ 43083760 (+)
LOC118956122 NA coding downstream 43249 43943124 ~ 43986958 (+)
LOC110504116 LOC106586120 coding downstream 175947 44075822 ~ 44208107 (+)
LOC110520002 LOC106586124 coding downstream 570296 44470171 ~ 44475272 (+)
LOC118964364 NA coding downstream 934636 44834511 ~ 44834565 (+)
cd18 cd18 coding downstream 978785 44878660 ~ 44903676 (+)
G261269 NA non-coding upstream 2113 43897347 ~ 43897554 (+)
G261268 NA non-coding upstream 2549 43895840 ~ 43897118 (+)
G261217 NA non-coding upstream 56091 43840940 ~ 43843576 (+)
G261215 NA non-coding upstream 69174 43830170 ~ 43830493 (+)
G261213 NA non-coding upstream 70260 43829183 ~ 43829407 (+)
G261274 NA non-coding downstream 1033 43900908 ~ 43901187 (+)
G261277 LOC105893191 non-coding downstream 4627 43904502 ~ 43904875 (+)
G261278 NA non-coding downstream 5171 43905046 ~ 43905310 (+)
G261279 NA non-coding downstream 5679 43905554 ~ 43905842 (+)
G261283 NA non-coding downstream 10839 43910714 ~ 43910969 (+)
LOC110519969 LOC106586020 other upstream 3447487 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 4231579 39658753 ~ 39668297 (+)
G254816 NA other upstream 5055111 38843510 ~ 38844556 (+)
G254445 NA other upstream 5298801 38600487 ~ 38600866 (+)
G254204 NA other upstream 5457933 38441166 ~ 38441734 (+)
G261749 NA other downstream 352194 44252069 ~ 44252551 (+)
G262037 NA other downstream 620544 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 1939046 45838921 ~ 45839480 (+)
G263710 NA other downstream 2034244 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 2175609 46075484 ~ 46079425 (+)

Expression


Co-expression Network